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[ Quellcode: tree-puzzle  ]

Paket: tree-ppuzzle (5.2-5) [universe]

Links für tree-ppuzzle

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Ubuntu-Ressourcen:

Quellcode-Paket tree-puzzle herunterladen:

Betreuer:

Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.

Original Maintainers (usually from Debian):

  • Debian-Med Packaging Team (E-Mail-Archiv)
  • Andreas Tille
  • Charles Plessy

It should generally not be necessary for users to contact the original maintainer.

Externe Ressourcen:

Ähnliche Pakete:

Parallelized reconstruction of phylogenetic trees by maximum likelihood

TREE-PUZZLE (the new name for PUZZLE) is an interactive console program that implements a fast tree search algorithm, quartet puzzling, that allows analysis of large data sets and automatically assigns estimations of support to each internal branch. TREE-PUZZLE also computes pairwise maximum likelihood distances as well as branch lengths for user specified trees. Branch lengths can also be calculated under the clock-assumption. In addition, TREE-PUZZLE offers a novel method, likelihood mapping, to investigate the support of a hypothesized internal branch without computing an overall tree and to visualize the phylogenetic content of a sequence alignment.

This is the parallelized version of tree-puzzle.

Andere Pakete mit Bezug zu tree-ppuzzle

  • hängt ab von
  • empfiehlt
  • schlägt vor
  • enhances
  • dep: lam-runtime
    LAM runtime environment for executing parallel programs
  • dep: libc6 (>= 2.4)
    Embedded GNU C Library: Shared libraries
    auch ein virtuelles Paket, bereitgestellt durch libc6-udeb
  • dep: liblam4
    Shared libraries used by LAM parallel programs
  • dep: libsprng2
    The SPRNG Scalable Parallel RNG library -- library package
  • rec: tree-puzzle-doc
    Reconstruction of phylogenetic trees by maximum likelihood
  • sug: phylip
    [Biology] A package of programs for inferring phylogenies
  • sug: treetool
    Paket nicht verfügbar

tree-ppuzzle herunterladen

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amd64 149,5 kB368,0 kB [Liste der Dateien]
i386 133,6 kB356,0 kB [Liste der Dateien]