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[ Quellcode: ssake  ]

Paket: ssake (3.4-1) [universe]

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Betreuer:

Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.

Original Maintainers (usually from Debian):

  • Debian-Med Packaging Team (E-Mail-Archiv)
  • Andreas Tille
  • Charles Plessy

It should generally not be necessary for users to contact the original maintainer.

Externe Ressourcen:

Ähnliche Pakete:

genomics application for assembling millions of very short DNA sequences

The Short Sequence Assembly by K-mer search and 3′ read Extension (SSAKE) is a genomics application for aggressively assembling millions of short nucleotide sequences by progressively searching for perfect 3′-most k-mers using a DNA prefix tree. SSAKE is designed to help leverage the information from short sequences reads by stringently clustering them into contigs that can be used to characterize novel sequencing targets.

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  • sug: ssake-examples
    example data for SSAKE, a genomic assembler of short reads

ssake herunterladen

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