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Paketti: clustalw (2.0.10-1) [multiverse]

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Ylläpitäjä:

Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.

Original Maintainers (usually from Debian):

  • Debian-Med Packaging Team (Mail Archive)
  • Steffen Moeller
  • Charles Plessy

It should generally not be necessary for users to contact the original maintainer.

External Resources:

Samankaltaisia paketteja:

global multiple nucleotide or peptide sequence alignment

This program performs an alignment of multiple nucleotide or amino acid sequences. It recognizes the format of input sequences and whether the sequences are nucleic acid (DNA/RNA) or amino acid (proteins). The output format may be selected from in various formats for multiple alignments such as Phylip or FASTA. Clustal W is very well accepted.

The output of Clustal W can be edited manually but preferably with an alignment editor like SeaView or within its companion Clustal X. When building a model from your alignment, this can be applied for improved database searches. The Debian package hmmer creates such in form of an HMM.

For details and citation purposes see paper "Clustal W and Clustal X version 2.0", Larkin M., et al. Bioinformatics 2007 23(21):2947-2948

Muut pakettiin clustalw liittyvät paketit

  • depends
  • recommends
  • suggests
  • enhances
  • dep: libc6 (>= 2.4)
    Embedded GNU C Library: Shared libraries
    myös näennäispaketti, jonka toteuttaa libc6-udeb
  • dep: libgcc1 (>= 1:4.1.1)
    GCC support library
  • dep: libstdc++6 (>= 4.2.1)
    The GNU Standard C++ Library v3
  • sug: clustalx
    Multiple alignment of nucleic acid and protein sequences (graphical interface)
  • sug: seaview
    Multiplatform interface for sequence alignment and phylogeny
  • enh: bioperl-run
    Wrapper modules for BioPerl
  • enh: emboss
    the european molecular biology open software suite
  • enh: t-coffee
    Multiple Sequence Alignment

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amd64 328.5 kt876.0 kt [tiedostoluettelo]
i386 314.6 kt852.0 kt [tiedostoluettelo]