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Paquet : boxshade (3.3.1-2) [universe]

Liens pour boxshade

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Télécharger le paquet source boxshade:

Responsable :

Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.

Original Maintainers (usually from Debian):

  • Debian-Med Packaging Team (Mail Archive)
  • Steffen Moeller
  • Charles Plessy

It should generally not be necessary for users to contact the original maintainer.

Paquets similaires :

Pretty-printing of multiple sequence alignments

Boxshade is a program for creating good looking printouts from multiple-aligned protein or DNA sequences. The program does not perform the alignment by itself and requires as input a file that was created by a multiple alignment program or manually edited with respective tools.

Boxshade reads multiple-aligned sequences from either PILEUP-MSF, CLUSTAL-ALN, MALIGNED-data and ESEE-save files (limited to a maximum of 150 sequences with up to 10000 elements each). Various kinds of shading can be applied to identical/similar residues. Output is written to screen or to a file in the following formats: ANSI/VT100, PS/EPS, RTF, HPGL, ReGIS, LJ250-printer, ASCII, xFIG, PICT, HTML

 Homepage: http://www.ch.embnet.org/software/BOX_form.html

Autres paquets associés à boxshade

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.6.1-1)
    bibliothèque C GNU : bibliothèques partagées
    also a virtual package provided by libc6-udeb
  • sug: kalign
    Global and progressive multiple sequence alignment
    or clustalw
    Global multiple nucleotide or peptide sequence alignment
    or mafft
    Multiple alignment program for amino acid or nucleotide sequences
    or hmmer
    profile hidden Markov models for protein sequence analysis
  • sug: seaview
    Multiple sequence alignment editor
  • sug: texlive-latex-extra
    TeX Live: LaTeX supplementary packages
  • sug: xfig
    Facility for Interactive Generation of figures under X11

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Architecture Taille du paquet Espace occupé Fichiers
amd64 51.0 ko244 ko [liste des fichiers]
i386 44.8 ko232 ko [liste des fichiers]