Package: kalign (2.03-1) [universe]
Links for kalign
Ubuntu Resources:
Download Source Package kalign:
Maintainer:
Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.
Original Maintainers (usually from Debian):
- Debian-Med Packaging Team (Mail Archive)
- Charles Plessy
It should generally not be necessary for users to contact the original maintainer.
Similar packages:
Global and progressive multiple sequence alignment
Kalign is a command line tool to perform multiple alignment of biological sequences. It employs the Wu-Manber string-matching algorithm, to improve both the accuracy and speed of the alignment. It uses global, progressive alignment approach, enriched by employing an approximate string-matching algorithm to calculate sequence distances and by incorporating local matches into the otherwise global alignment. In comparisons made by its authors, Kalign was about 10 times faster than ClustalW and, depending on the alignment size, up to 50 times faster than popular iterative methods. It has been published in Lassmann and Sonnhammer, BMC Bioinformatics 2005, 6:298.
Homepage: http://msa.cgb.ki.se
Other Packages Related to kalign
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- dep: libc6 (>= 2.5-0ubuntu1)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
Download kalign
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 77.6 kB | 220 kB | [list of files] |
| i386 | 71.5 kB | 204 kB | [list of files] |
| powerpc | 77.2 kB | 228 kB | [list of files] |