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[ Source: amap-align  ]

Package: amap-align (2.0-2) [universe]

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Protein multiple alignment by sequence annealing

AMAP is a command line tool to perform multiple alignment of peptidic sequences. It utilizes posterior decoding, and a sequence-annealing alignment, instead of the traditional progressive alignment method. It is the only alignment program that allows to control the sensitivity / specificity tradeoff. It is based on the ProbCons source code, but uses alignment metric accuracy and eliminates the consistency transformation.

 Homepage: http://bio.math.berkeley.edu/amap/

Other Packages Related to amap-align

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.5-0ubuntu1)
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • dep: libgcc1 (>= 1:4.2-20070208)
    GCC support library
  • dep: libstdc++6 (>= 4.2-20070208)
    The GNU Standard C++ Library v3

Download amap-align

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 107.6 kB280 kB [list of files]
i386 95.7 kB260 kB [list of files]