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[ Source: clustalw  ]

Package: clustalx (1.83-3ubuntu1) [multiverse]

Links for clustalx

Ubuntu Resources:

Download Source Package clustalw:

Maintainer:

Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.

Original Maintainers (usually from Debian):

  • Debian-Med Packaging Team (Mail Archive)
  • Steffen Moeller
  • Charles Plessy

It should generally not be necessary for users to contact the original maintainer.

Similar packages:

GUI for clustalw

This package offers a GUI interface for the ClustalW multiple sequence alignment program. It provides an integrated environment for performing multiple sequence- and profile-alignments to analyse the results. The sequence alignment is displayed in a window on the screen. A versatile coloring scheme has been incorporated to highlight conserved features in the alignment. For professional presentations, one should use the texshade LaTeX package or boxshade.

The pull-down menus at the top of the window allow you to select all the options required for traditional multiple sequence and profile alignment. You can cut-and-paste sequences to change the order of the alignment; you can select a subset of sequences to be aligned; you can select a sub-range of the alignment to be realigned and inserted back into the original alignment.

An alignment quality analysis can be performed and low-scoring segments or exceptional residues can be highlighted. 

 URL: ftp://ftp-igbmc.u-strasbg.fr/pub/ClustalX/
 URL: ftp://ftp.ebi.ac.uk/pub/software/unix/clustalx/

Other Packages Related to clustalx

  • depends
  • recommends
  • suggests
  • dep: clustalw
    Global multiple nucleotide or peptide sequence alignment
  • dep: lesstif2 (>= 1:0.95.0-2.1)
    OSF/Motif 2.1 implementation released under LGPL
  • dep: libc6 (>= 2.4)
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • dep: libncbi6 (>= 6.1.20070822)
    NCBI libraries for biology applications
  • dep: libvibrant6a (>= 6.1.20070822)
    NCBI libraries for graphic biology applications
  • dep: libx11-6
    X11 client-side library
  • dep: libxmu6
    X11 miscellaneous utility library
  • dep: libxt6
    X11 toolkit intrinsics library
  • sug: boxshade
    Pretty-printing of multiple sequence alignments
  • sug: texshade
    Package not available
    or texlive-latex-extra
    TeX Live: LaTeX supplementary packages

Download clustalx

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 243.8 kB680 kB [list of files]
i386 223.7 kB660 kB [list of files]