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[ Source: t-coffee  ]

Package: t-coffee (5.31-1) [universe]

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Download Source Package t-coffee:

Maintainer:

Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.

Original Maintainers (usually from Debian):

  • Debian-Med Packaging Team (Mail Archive)
  • Steffen Moeller
  • Charles Plessy

It should generally not be necessary for users to contact the original maintainer.

External Resources:

Similar packages:

Multiple Sequence Alignment

T-Coffee is a multiple sequence alignment package. Given a set of sequences (Proteins or DNA), T-Coffee generates a multiple sequence alignment. Version 2.00 and higher can mix sequences and structures.

T-Coffee allows the combination of a collection of multiple/pairwise, global or local alignments into a single model. It also allows to estimate the level of consistency of each position within the new alignment with the rest of the alignments. See the pre-print for more information

Other Packages Related to t-coffee

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.7-1)
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • sug: boxshade
    Pretty-printing of multiple sequence alignments
  • sug: clustalw
    Global multiple nucleotide or peptide sequence alignment
  • sug: dialign-t
    Segment-based multiple sequence alignment
  • sug: kalign
    Global and progressive multiple sequence alignment
  • sug: mafft
    Multiple alignment program for amino acid or nucleotide sequences
  • sug: muscle
    [Biology] multiple alignment program of protein sequences
  • sug: poa
    Partial Order Alignment for multiple sequence alignment
  • sug: probcons
    PROBabilistic CONSistency-based multiple sequence alignment
  • sug: seaview
    Multiple sequence alignment editor
  • sug: t-coffee-doc
    PDF and HTML accompaning documents to T-Coffee

Download t-coffee

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 516.9 kB1,180.0 kB [list of files]
i386 471.6 kB1,108.0 kB [list of files]