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[ Source: clustalx  ]

Package: clustalx (2.0.12-2) [multiverse]

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Download Source Package clustalx:

Maintainer:

Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.

Original Maintainers (usually from Debian):

  • Debian Med Packaging Team (Mail Archive)
  • Steffen Moeller
  • Charles Plessy

It should generally not be necessary for users to contact the original maintainer.

External Resources:

Similar packages:

Multiple alignment of nucleic acid and protein sequences (graphical interface)

This package offers a GUI interface for the Clustal multiple sequence alignment program. It provides an integrated environment for performing multiple sequence- and profile-alignments to analyse the results. The sequence alignment is displayed in a window on the screen. A versatile coloring scheme has been incorporated to highlight conserved features in the alignment. For professional presentations, one should use the texshade LaTeX package or boxshade.

The pull-down menus at the top of the window allow you to select all the options required for traditional multiple sequence and profile alignment. You can cut-and-paste sequences to change the order of the alignment; you can select a subset of sequences to be aligned; you can select a sub-range of the alignment to be realigned and inserted back into the original alignment.

An alignment quality analysis can be performed and low-scoring segments or exceptional residues can be highlighted.

Other Packages Related to clustalx

  • depends
  • recommends
  • suggests
  • enhances
  • dep: libc6 (>= 2.4)
    Embedded GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • dep: libgcc1 (>= 1:4.1.1)
    GCC support library
  • dep: libqt4-xml (>= 4:4.5.3)
    Qt 4 XML module
  • dep: libqtcore4 (>= 4:4.6.1)
    Qt 4 core module
  • dep: libqtgui4 (>= 4:4.5.3)
    Qt 4 GUI module
  • dep: libstdc++6 (>= 4.4.0)
    The GNU Standard C++ Library v3
  • sug: boxshade
    Pretty-printing of multiple sequence alignments
  • sug: clustalw
    global multiple nucleotide or peptide sequence alignment
  • sug: texshade
    Package not available
    or texlive-latex-extra
    TeX Live: LaTeX supplementary packages

Download clustalx

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 547.5 kB1,444.0 kB [list of files]
i386 533.7 kB1,416.0 kB [list of files]