» Ubuntu » Packages » lucid (10.04LTS) » science » sibsim4
lucid  ] [  precise  ] [  raring  ] [  saucy  ] [  trusty  ] [  utopic  ]
[ Source: sibsim4  ]

Package: sibsim4 (0.17-1) [universe]

Links for sibsim4

Screenshot

Ubuntu Resources:

Download Source Package sibsim4:

Maintainer:

Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.

Original Maintainers (usually from Debian):

  • Debian-Med Packaging Team (Mail Archive)
  • Nelson A. de Oliveira

It should generally not be necessary for users to contact the original maintainer.

External Resources:

Similar packages:

align expressed RNA sequences on a DNA template

The SIBsim4 project is based on sim4, which is a program designed to align an expressed DNA sequence with a genomic sequence, allowing for introns. SIBsim4 is a fairly extensive rewrite of the original code with the following goals:

 * speed improvement;
 * allow large, chromosome scale, DNA sequences to be used;
 * provide more detailed output about splice types;
 * provide more detailed output about polyA sites;
 * misc code cleanups and fixes.

Other Packages Related to sibsim4

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.4)
    Embedded GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb

Download sibsim4

Download for all available architectures
Architecture Package Size Installed Size Files
i386 31.5 kB96.0 kB [list of files]