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[ Source: tree-puzzle  ]

Package: tree-puzzle-doc (5.2-5) [universe]

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Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.

Original Maintainers (usually from Debian):

  • Debian-Med Packaging Team (Mail Archive)
  • Andreas Tille
  • Charles Plessy

It should generally not be necessary for users to contact the original maintainer.

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Reconstruction of phylogenetic trees by maximum likelihood

TREE-PUZZLE (the new name for PUZZLE) is an interactive console program that implements a fast tree search algorithm, quartet puzzling, that allows analysis of large data sets and automatically assigns estimations of support to each internal branch. TREE-PUZZLE also computes pairwise maximum likelihood distances as well as branch lengths for user specified trees. Branch lengths can also be calculated under the clock-assumption. In addition, TREE-PUZZLE offers a novel method, likelihood mapping, to investigate the support of a hypothesized internal branch without computing an overall tree and to visualize the phylogenetic content of a sequence alignment.

This is the documentation package for tree-puzzle

Other Packages Related to tree-puzzle-doc

  • depends
  • recommends
  • suggests
  • enhances
  • rec: tree-puzzle
    Reconstruction of phylogenetic trees by maximum likelihood
    or tree-ppuzzle
    Parallelized reconstruction of phylogenetic trees by maximum likelihood

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