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[ Source: samtools  ]

Package: samtools (0.1.7a~dfsg-1) [universe]

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processing sequence alignments in SAM and BAM formats

Samtools is a set of utilities that manipulate nucleotide sequence alignments in the binary BAM format. It imports from and exports to the ascii SAM (Sequence Alignment/Map) format, does sorting, merging and indexing, and allows to retrieve reads in any regions swiftly. It is designed to work on a stream, and is able to open a BAM (not SAM) file on a remote FTP or HTTP server.

Other Packages Related to samtools

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.7)
    Embedded GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • dep: libncurses5 (>= 5.6+20071006-3)
    shared libraries for terminal handling
  • dep: zlib1g (>= 1:1.2.3.3.dfsg)
    compression library - runtime

Download samtools

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 427.1 kB756.0 kB [list of files]
i386 428.2 kB756.0 kB [list of files]