Package: sibsim4 (0.17-1) [universe]
Links for sibsim4
Download Source Package sibsim4:
Original Maintainers (usually from Debian):
- Debian-Med Packaging Team (Mail Archive)
- Nelson A. de Oliveira
It should generally not be necessary for users to contact the original maintainer.
- Homepage [sibsim4.sourceforge.net]
align expressed RNA sequences on a DNA template
The SIBsim4 project is based on sim4, which is a program designed to align an expressed DNA sequence with a genomic sequence, allowing for introns. SIBsim4 is a fairly extensive rewrite of the original code with the following goals:
* speed improvement; * allow large, chromosome scale, DNA sequences to be used; * provide more detailed output about splice types; * provide more detailed output about polyA sites; * misc code cleanups and fixes.
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