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Source Package: tophat (2.0.3-1) [universe]

Links for tophat

Ubuntu Resources:

Maintainer:

Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.

Original Maintainers (usually from Debian):

  • Debian Med Packaging Team (Mail Archive)
  • Carlos Borroto
  • Alexandre Mestiashvili
  • Andreas Tille

It should generally not be necessary for users to contact the original maintainer.

External Resources:

The following binary packages are built from this source package:
tophat
fast splice junction mapper for RNA-Seq reads

Other Packages Related to tophat

  • build-depends
  • build-depends-indep
  • adep: debhelper (>= 9)
    helper programs for debian/rules
  • adep: autotools-dev
    Update infrastructure for config.{guess,sub} files
  • adep: libbam-dev (>= 0.1.16)
    manipulates nucleotide sequence alignments in BAM or SAM format
  • adep: zlib1g-dev
    compression library - development
  • adep: dh-autoreconf
    debhelper add-on to call autoreconf and clean up after the build
  • adep: python (>= 2.6.6-3~)
    interactive high-level object-oriented language (default version)
  • adep: seqan-dev (>= 1.3~)
    C++ library for the analysis of biological sequences
  • adep: libboost-thread-dev
    portable C++ multi-threading (default version)
  • adep: help2man
    Automatic manpage generator

Download tophat

FileSize (in kB)MD5 checksum
tophat_2.0.3-1.dsc 2.1 kB b80afce22f5cf74d06aac9d0d1977b7e
tophat_2.0.3.orig.tar.gz 418.5 kB ab162f11f5cbd518fca03d316da61f56
tophat_2.0.3-1.debian.tar.gz 5.5 kB 27f0769ef5c947cb1a35b8d85c1f811d
Debian Package Source Repository (VCS: Git)
git://git.debian.org/debian-med/tophat.git
Debian Package Source Repository (Browsable)
http://git.debian.org/?p=debian-med/tophat.git