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[ Source: bioperl  ]

Пакунок: bioperl (1.5.2.102-1ubuntu1) [universe]

Links for bioperl

Ubuntu Resources:

Download Source Package bioperl:

Maintainer:

Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.

Original Maintainers (usually from Debian):

  • Debian-Med Packaging Team (Mail Archive)
  • Charles Plessy
  • Matt Hope
  • Steffen Moeller

It should generally not be necessary for users to contact the original maintainer.

External Resources:

Similar packages:

Perl tools for computational molecular biology

The Bioperl project is a coordinated effort to collect computational methods routinely used in bioinformatics into a set of standard CPAN-style, well-documented, and freely available Perl modules. It is well-accepted throughout the community and used in many high-profile projects, e.g., Ensembl.

Інші пакунки пов'язані з bioperl

  • depends
  • recommends
  • suggests
  • dep: libio-string-perl
    Emulate IO::File interface for in-core strings
  • dep: perl (>= 5.6.0-16)
    Мова Практичного Видобування та Побудування Звітів Лари Уолла (Larry Wall)
  • rec: libace-perl
    Package not available
  • rec: libbio-asn1-entrezgene-perl
    parser for NCBI Entrez Gene and NCBI Sequence records
  • rec: libclass-autoclass-perl
    Package not available
  • rec: libclone-perl
    recursively copy Perl datatypes
  • rec: libconvert-binary-c-perl
    Package not available
  • rec: libdata-stag-xmlwriter-perl
    Package not available
  • rec: libdbd-mysql-perl
    Інтерфейс Perl5 до БД MySQL.
  • rec: libgd-gd2-perl
    Perl module wrapper for libgd - gd2 variant
  • rec: libgraph-perl
    Perl module for graph data structures and algorithms
  • rec: libhtml-parser-perl
    A collection of modules that parse HTML text documents
  • rec: libpostscript-textblock-perl
    Package not available
  • rec: libset-scalar-perl
    set for scalar operations
  • rec: libsoap-lite-perl
    Client and server side SOAP implementation
  • rec: libspreadsheet-parseexcel-perl
    access information from Excel Spreadsheets
  • rec: libsvg-graph-perl
    visualize your data in SVG format
  • rec: libsvg-perl
    perl module to generate SVG images
  • rec: libtext-shellwords-perl
    Package not available
  • rec: liburi-perl
    Manipulates and accesses URI strings
  • rec: libwww-perl
    Бібліотека клієнт/сервер WWW для Perl (відома як LWP)
  • rec: libxml-parser-perl
    Perl module for parsing XML files
  • rec: libxml-perl
    Модулі Perl для роботи з XML
  • rec: libxml-sax-perl
    Perl module for using and building Perl SAX2 XML processors
  • rec: libxml-sax-writer-perl
    Perl module for a SAX2 XML writer
  • rec: libxml-twig-perl
    Perl module for processing huge XML documents in tree mode
  • rec: libxml-writer-perl
    Perl module for writing XML documents
  • sug: blast2
    Basic Local Alignment Search Tool
  • sug: clustalw
    Global multiple nucleotide or peptide sequence alignment
  • sug: emboss
    The European Molecular Biology Open Software Suite
  • sug: exonerate
    tool for comparison of long biological sequences
  • sug: glimmer
    Package not available
  • sug: hmmer
    profile hidden Markov models for protein sequence analysis
  • sug: molphy
    [Biology] Program Package for MOLecular PHYlogenetics
  • sug: phylip
    [Biology] A package of programs for inferring phylogenies
  • sug: primer3
    Tool to design flanking oligo nucleotides for DNA amplification
  • sug: repeatmasker
    Package not available
  • sug: sim4
    tool for aligning cDNA and genomic DNA
    or sibsim4
    align expressed RNA sequences on a DNA template
  • sug: spidey
    Package not available
  • sug: wise
    comparison of biopolymers, commonly DNA and protein sequences

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