» Ubuntu » Packages » xenial » gnu-r

Software Packages in "xenial", Subsection gnu-r

r-bioc-affy (1.48.0-1) [universe]
BioConductor methods for Affymetrix Oligonucleotide Arrays
r-bioc-affyio (1.40.0-1) [universe]
BioConductor tools for parsing Affymetrix data files
r-bioc-altcdfenvs (1:2.32.0-1) [universe]
BioConductor alternative CDF environments
r-bioc-annotate (1.48.0+dfsg-1) [universe]
BioConductor annotation for microarrays
r-bioc-annotationdbi (1.32.0-1) [universe]
GNU R Annotation Database Interface for BioConductor
r-bioc-aroma.light (3.0.0-1) [universe]
BioConductor methods normalization and visualization of microarray data
r-bioc-biobase (2.30.0-1) [universe]
base functions for Bioconductor
r-bioc-biocgenerics (0.16.0-1) [universe]
generic functions for Bioconductor
r-bioc-biocinstaller (1.20.0-1) [universe]
Install/Update Bioconductor and CRAN Packages
r-bioc-biocparallel (1.4.0-1) [universe]
BioConductor facilities for parallel evaluation
r-bioc-biomart (2.26.0-1) [universe]
GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)
r-bioc-biostrings (2.38.0-1) [universe]
GNU R string objects representing biological sequences
r-bioc-biovizbase (1.18.0-1) [universe]
GNU R basic graphic utilities for visualization of genomic data
r-bioc-bsgenome (1.38.0-1) [universe]
BioConductor infrastructure for Biostrings-based genome data packages
r-bioc-cummerbund (2.12.0-1) [universe]
tool for analysis of Cufflinks RNA-Seq output
r-bioc-ebseq (1.10.0-1) [universe]
R package for RNA-Seq Differential Expression Analysis
r-bioc-edger (3.12.0+dfsg-1) [universe]
Empirical analysis of digital gene expression data in R
r-bioc-genefilter (1.52.0-2) [universe]
methods for filtering genes from microarray experiments
r-bioc-genomeinfodb (1.6.0-1) [universe]
BioConductor utilities for manipulating chromosome identifiers
r-bioc-genomicalignments (1.6.1-1) [universe]
BioConductor representation and manipulation of short genomic alignments
r-bioc-genomicfeatures (1.22.4-1) [universe]
GNU R tools for making and manipulating transcript centric annotations
r-bioc-genomicranges (1.22.0-1) [universe]
BioConductor representation and manipulation of genomic intervals
r-bioc-graph (1.48.0-1) [universe]
handle graph data structures for BioConductor
r-bioc-gviz (1.14.0-1) [universe]
Plotting data and annotation information along genomic coordinates
r-bioc-hypergraph (1.42.0-1) [universe]
BioConductor hypergraph data structures
r-bioc-iranges (2.4.1-1) [universe]
GNU R low-level containers for storing sets of integer ranges
r-bioc-limma (3.26.1+dfsg-1) [universe]
linear models for microarray data
r-bioc-makecdfenv (1.46.0-1) [universe]
BioConductor CDF Environment Maker
r-bioc-multtest (2.26.0-1) [universe]
Bioconductor resampling-based multiple hypothesis testing
r-bioc-preprocesscore (1.32.0-1) [universe]
BioConductor collection of pre-processing functions
r-bioc-qvalue (2.2.0-1) [universe]
GNU R package for Q-value estimation for FDR control
r-bioc-rsamtools (1.22.0-1) [universe]
GNU R binary alignment (BAM), variant call (BCF), or tabix file import
r-bioc-rtracklayer (1.30.1-1) [universe]
GNU R interface to genome browsers and their annotation tracks
r-bioc-s4vectors (0.8.0-1) [universe]
BioConductor S4 implementation of vectors and lists
r-bioc-shortread (1.28.0-1) [universe]
GNU R classes and methods for high-throughput short-read sequencing data
r-bioc-snpstats (1.20.0+dfsg-1) [universe]
BioConductor SnpMatrix and XSnpMatrix classes and methods
r-bioc-summarizedexperiment (1.0.0-1) [universe]
BioConductor assay container
r-bioc-variantannotation (1.16.3-1) [universe]
BioConductor annotation of genetic variants
r-bioc-xvector (0.10.0-1) [universe]
BioConductor representation and manpulation of external sequences
r-cran-acepack ( [universe]
GNU R package for regression transformations
r-cran-ade4 (1.7-2-1) [universe]
GNU R analysis of ecological data
r-cran-afex (0.15-2-1) [universe]
GNU R package for analyzing factorial experiments using ANOVA or mixed models
r-cran-amelia (1.7.4-1) [universe]
GNU R package supporting multiple imputation of missing data
r-cran-amore (0.2-15-1) [universe]
GNU R: A MORE flexible neural network package
r-cran-ape (3.4-1) [universe]
GNU R package for Analyses of Phylogenetics and Evolution
r-cran-base64enc (0.1-2-1) [universe]
GNU R package that provides tools for base64 encoding
r-cran-batchjobs (1.6-1) [universe]
GNU R batch computing
r-cran-bayesfactor (0.9.12-2-1) [universe]
GNU R package providing Bayes factors for t-tests, ANOVAs and contingency tables
r-cran-bbmisc (1.9-1) [universe]
GNU R Miscellaneous helper functions for B. Bischl
r-cran-beeswarm (0.2.1-1) [universe]
bee swarm plot, an alternative to stripchart
r-cran-biasedurn (1.06.1-1) [universe]
GNU R Biased Urn model distributions
r-cran-bio3d (2.2-4-1) [universe]
GNU R package for biological structure analysis
r-cran-blockmodeling (0.1.8-1) [universe]
Generalized and classical blockmodeling of valued networks
r-cran-bms (0.3.4-1) [universe]
GNU R package for Bayesian model averaging for linear models
r-cran-boolnet (2.1.1-1) [universe]
assembling, analyzing and visualizing Boolean networks
r-cran-bradleyterry2 (1.0-6-1) [universe]
GNU R package for using Bradley-Terry models
r-cran-brew (1.0-6-1) [universe]
GNU R templating framework for report generation
r-cran-brglm (0.5-9-1) [universe]
GNU R package for bias reduction in binomial-response GLMs
r-cran-caret (6.0-47+dfsg1-1) [universe]
GNU R package for classification and regression training
r-cran-checkmate (1.6.0-1) [universe]
GNU R fast and versatile argument checks
r-cran-class (7.3-14-1) [universe]
GNU R package for classification
r-cran-cmprsk (2.2-7-1) [universe]
GNU R subdistribution analysis of competing risks
r-cran-coin (1.1-2-1) [universe]
GNU R package providing conditional inference procedures
r-cran-contfrac (1.1-9-1) [universe]
GNU R package providing various utilities for evaluating continued fractions
r-cran-conting (1.5-1) [universe]
GNU R package for Bayesian analysis of contingency tables
r-cran-crayon (1.3.1-1) [universe]
GNU R colored terminal output
r-cran-cubature (1.1-2-1) [universe]
GNU R package for adaptive multivariate integration
r-cran-deal (1:1.2-37-2) [universe]
Learning Bayesian Networks with Mixed Variables
r-cran-deldir (0.1-9-1) [universe]
GNU R Delaunay Triangulation and Dirichlet (Voronoi) Tessellation
r-cran-deoptimr (1.0-4-1) [universe]
GNU R package for Diffential Evolution in pure R
r-cran-desolve (1.12-1) [universe]
GNU R package providing functions that solve initial value problems
r-cran-diagnosismed (0.2.3-4) [universe]
medical diagnostic test accuracy analysis toolkit
r-cran-dichromat (2.0.0-3) [universe]
Color schemes for dichromats
r-cran-digest (0.6.9-1) [universe]
GNU R package for 'hash digest' of R data structures
r-cran-domc (1.3.4-1) [universe]
GNU R parallel excution backend for %dopar% using multicore
r-cran-doparallel (1.0.8-1) [universe]
GNU R foreach parallel adaptor for the parallel package
r-cran-dosefinding (0.9-13-1) [universe]
Planning and Analyzing Dose Finding experiments
r-cran-dosnow (1.0.14-1) [universe]
GNU R parallel excution backend for %dopar% using snow
r-cran-downloader (0.3-3) [universe]
GNU R package for downloading files over http and https
r-cran-e1071 (1.6-7-1) [universe]
GNU R package with miscellaneous functions of the Dept of Statisics (e1071)
r-cran-ecodist (1.2.9-1) [universe]
GNU R package for dissimilarity-based ecological analysis
r-cran-elliptic (1.3-5-1) [universe]
GNU R package providing elliptic and related functions
r-cran-energy (1.6.2-1) [universe]
GNU R package for energy statistics for distribution comparison
r-cran-epi (1.1.71-1) [universe]
GNU R epidemiological analysis
r-cran-epicalc ( [universe]
GNU R Epidemiological calculator
r-cran-epir (0.9-69-1) [universe]
GNU R Functions for analysing epidemiological data
r-cran-epitools (1:0.5-7-1build1) [universe]
GNU R Epidemiology Tools for Data and Graphics
r-cran-erm (0.14-0-6build1) [universe]
GNU R package for 'extended Rasch modelling'
r-cran-estimability (1.1-1-1) [universe]
GNU R package providing tools for determining estimability of linear functions
r-cran-etm (0.6-2-1) [universe]
GNU R empirical transition matrix
r-cran-evaluate (0.5.5-1) [universe]
GNU R parsing and evaluation tools
r-cran-evd (2.3-0-1) [universe]
GNU R Functions for extreme value distributions
r-cran-expm (0.99-1.1-1) [universe]
GNU R Computation of the matrix exponential and related quantities
r-cran-fail (1.3-1) [universe]
GNU R File Abstraction Interface Layer (FAIL) mimicking a key-value store
r-cran-fastcluster (1.1.16-2) [universe]
Fast hierarchical clustering routines for GNU R
r-cran-fastmatch (1.0-4-1) [universe]
GNU R package for fast match replacement for repeated look-ups
r-cran-foreach (1.4.3-1) [universe]
GNU R foreach looping support
r-cran-formatr (1.2.1-3) [universe]
Format R code automatically
r-cran-formula (1.2-1-1) [universe]
GNU R package for extended model formulas
r-cran-futile.logger (1.4.1-1) [universe]
logging utility for GNU R
r-cran-futile.options (1.0.0-2) [universe]
GNU R futile options management
r-cran-g.data (2.4-1) [universe]
GNU R package for delayed-data
r-cran-gam (1.12-2) [universe]
Generalized Additive Models for R
r-cran-gbm (2.1-1) [universe]
GNU R package "Generalized Boosted Regression Models"
r-cran-geepack (1.2-0-1) [universe]
Generalized Estimating Equation Package for R
r-cran-genabel (1.8-0-1) [universe]
GNU R package for genome-wide SNP association analysis
r-cran-genabel.data (1.0.0-1) [universe]
data package for genome-wide SNP association analysis
r-cran-ggplot2 (2.0.0-2) [universe]
implementation of the Grammar of Graphics
r-cran-gnm (1.0-8-1) [universe]
GNU R package for generalized nonlinear models
r-cran-gridextra (2.0.0-1) [universe]
GNU R package with extensions for the grid package
r-cran-gsl (1.9-10.1-1build1) [universe]
GNU R wrapper for the GNU Scientific Library
r-cran-gss (2.1-5-1) [universe]
GNU R package for multivariate estimation using smoothing splines
r-cran-gtable (0.1.2-1.1) [universe]
Arrange grobs in tables
r-cran-httpuv (1.3.3-3) [universe]
GNU R package of HTTP and WebSocket Server Library
r-cran-hwriter (1.3.2-1) [universe]
HTML Writer - Outputs R objects in HTML format
r-cran-hypergeo (1.2-11-1) [universe]
GNU R package providing the Gaussian hypergeometric for complex numbers
r-cran-igraph (0.7.1-1) [universe]
GNU R network analysis and visualization
r-cran-inline (0.3.14-1) [universe]
GNU R package to inline C, C++, Fortran functions from R
r-cran-int64 (1.1.2-2) [universe]
GNU R package for 64 bit integer types
r-cran-iterators (1.0.8-1) [universe]
GNU R iterator support for vectors, lists and other containers
r-cran-jsonlite (0.9.19-1) [universe]
Robust, High Performance JSON Parser and Generator for R
r-cran-kernlab (0.9-23-1) [universe]
GNU R package for kernel-based machine learning lab
r-cran-labeling (0.3-1) [universe]
GNU R Axis Labeling optimization
r-cran-lambda.r (1.1.7-2) [universe]
GNU R modeling data with functional programming
r-cran-learnbayes (2.15-2) [universe]
GNU R functions for learning bayesian inference
r-cran-lhs (0.10-1) [universe]
GNU R package "lhs: Latin Hypercube Samples"
r-cran-littler (0.3.0-2) [universe]
GNU R scripting and command-line front-end
r-cran-logspline (2.1.8-1) [universe]
GNU R package providing routines for the logspline density estimation
r-cran-lsmeans (2.21-1-1) [universe]
GNU R package providing least-squares means for linear, generalized linear, and mixed models
r-cran-magrittr (1.5-1) [universe]
GNU R forward-pipe operator
r-cran-maldiquant (1.12-1) [universe]
GNU R package for quantitative analysis of mass spectrometry data
r-cran-maldiquantforeign (0.9-2) [universe]
GNU R package providing import/export routines for MALDIquant
r-cran-mass (7.3-45-1) [universe]
GNU R package of Venables and Ripley's MASS
r-cran-matrixmodels (0.4-1-1) [universe]
GNU R package for sparse and dense matrix models
r-cran-matrixstats (0.14.2-1) [universe]
GNU R methods that apply to rows and columns of a matrix
r-cran-maxlik (1.2-0-1) [universe]
GNU R maximum likelihood estimation
r-cran-medadherence (1.03-2) [universe]
GNU R Medication Adherence: Commonly Used Definitions
r-cran-memoise (0.2.1-1) [universe]
Memoise functions
r-cran-mfilter (0.1.3-1) [universe]
GNU R package providing miscellaneous time series filters
r-cran-mime (0.4-2) [universe]
R package which maps filenames to MIME Types
r-cran-minqa (1.2.4-1) [universe]
GNU R package for quadratic optimisation without derivatives
r-cran-misctools (0.6-16-1) [universe]
GNU R miscellaneous tools and utilities
r-cran-mixtools (1.0.2-1) [universe]
GNU R tools for analyzing finite mixture models
r-cran-modeltools (0.2-21-1) [universe]
GNU R package providing a collection of tools to deal with statistical models
r-cran-multicore (0.2-1) [universe]
GNU R parallel processing on multi-core or multi-cpu machines
r-cran-munsell (0.4.2-1) [universe]
Munsell colour system
r-cran-mvnormtest (0.1-9-1) [universe]
GNU R package for multivariate normality test
r-cran-ncdf4 (1.15-1build1) [universe]
GNU R interface to Unidata netCDF format data files
r-cran-nloptr (1.0.4-1) [universe]
GNU R package for interface to NLopt
r-cran-nnet (7.3-12-1) [universe]
GNU R package for feed-forward neural networks
r-cran-nnls (1.4-1) [universe]
GNU R package for non-negative least squares (the Lawson-Hanson algorithm)
r-cran-numderiv (2014.2-1-1) [universe]
GNU R package for accurate numerical derivatives
r-cran-optparse (1.2.0-1) [universe]
GNU/R Command line option parser
r-cran-pbapply (1.1-3-1) [universe]
GNU R package providing progress bars for vectorized R functions
r-cran-pbivnorm (0.6.0-1) [universe]
GNU R package for calculating probabilities from a bivariate normal CDF
r-cran-pbkrtest (0.4-6-1) [universe]
GNU R package for tests in linear mixed-effect models
r-cran-permute (0.8-3-1) [universe]
R functions for generating restricted permutations of data
r-cran-phangorn (1.99.14-1) [universe]
GNU R package for phylogenetic analysis
r-cran-pkgkitten (0.1.3-1) [universe]
GNU R package to create simple packages
r-cran-plyr (1.8.3-1) [universe]
tools for splitting, applying and combining data
r-cran-polyclip (1.3-0-1) [universe]
GNU R Polygon Clipping
r-cran-polycub (0.5-1-1) [universe]
GNU R Cubature over Polygonal Domains
r-cran-praise (1.0.0-1) [universe]
GNU R praise users
r-cran-profilemodel (0.5-9-1) [universe]
GNU R tools for profiling inference functions
r-cran-proto (0.3-10-1build1) [universe]
Prototype object-based programming
r-cran-pscl (1.4.9-1) [universe]
GNU R package for discrete data models
r-cran-pvclust (2.0-0-1) [universe]
Hierarchical Clustering with P-Values via Multiscale Bootstrap
r-cran-pwt (7.1.1-2) [universe]
GNU R package for the Penn World Tables (version 5.6 to 7.1)
r-cran-pwt8 (8.1.0-1) [universe]
GNU R package for the Penn World Tables (version 8)
r-cran-quantreg (5.21-1) [universe]
GNU R package for quantile regression
r-cran-qvcalc (0.8-9-1) [universe]
GNU R package for computing quasi variances for factor effects
r-cran-r.methodss3 (1.7.0-1) [universe]
GNU R utility function for defining S3 methods
r-cran-r.oo (1.19.0-2) [universe]
GNU R object-oriented programming with or without references
r-cran-r.utils (2.1.0-1) [universe]
GNU R various programming utilities
r-cran-randomfields (3.0.44-1) [universe]
GNU R simulation and analysis of random fields
r-cran-raschsampler (0.8-6-1) [universe]
GNU R package for sampling binary matrices with fixed margins
r-cran-rcmdrmisc (1.0-3-1) [universe]
GNU R package for miscellaneous Rcmdr utilities
r-cran-rcpparmadillo (0.6.500.4.0-1) [universe]
GNU R package for Armadillo C++ linear algebra library
r-cran-rcppeigen ( [universe]
GNU R package for Eigen templated linear algebra
r-cran-rcurl (1.95-4.7-1) [universe]
GNU R General network (HTTP/FTP/...) client interface
r-cran-readbrukerflexdata (1.8.2-1) [universe]
GNU R package to read Bruker Daltonics *flex format files
r-cran-readmzxmldata (2.8-1) [universe]
GNU R package to read mass spectrometry data in mzXML format
r-cran-readxl (0.1.0-1) [universe]
GNU R package to read Excel files
r-cran-reshape (0.8.5-1) [universe]
Flexibly reshape data
r-cran-reshape2 (1.4-1) [universe]
Flexibly reshape data: a reboot of the reshape package
r-cran-rinside (0.2.13-1) [universe]
GNU R package to embed R in C++ application
r-cran-rjags (1:4-5-1) [universe]
R interface to the JAGS Bayesian statistics package
r-cran-rjson (0.2.15-1) [universe]
GNU R package for converting between R and JSON objects
r-cran-rms (4.4-1-1) [universe]
GNU R regression modeling strategies by Frank Harrell
r-cran-rneos (0.2-8-1) [universe]
GNU R package with XML-RPC interface to NEOS
r-cran-rnetcdf (1.6.3-1-1build2) [universe]
GNU R package that provides an R interface to NetCDF datasets
r-cran-rniftilib (0.0-35.r79-1) [universe]
GNU/R interface to NIFTICLIB
r-cran-rpostgresql (0.4-1) [universe]
GNU R package providing database interface and driver for PostgreSQL
r-cran-rsclient (0.7-3-1) [universe]
GNU R package providing an Rserve client
r-cran-rsdmx (0.5.1+dfsg-1) [universe]
GNU R package for the Statistical Data and Metadata Exchange (SDMX) framework
r-cran-rsolnp (1.14+dfsg-1) [universe]
GNU R general non-linear optimization
r-cran-rsqlite (1.0.0-2) [universe]
Database Interface R driver for SQLite
r-cran-rsymphony (0.1-21-1build1) [universe]
GNU R interface to the SYMPHONY MILP solver
r-cran-scales (0.3.0-1) [universe]
Scale functions for graphics
r-cran-scatterplot3d (0.3-36-1) [universe]
GNU R package for Visualizing Multivariate Data
r-cran-segmented (0.5-0.0-1) [universe]
GNU R segmented relationships in regression models
r-cran-sendmailr (1.2-1-1) [universe]
send email using GNU R
r-cran-seqinr (3.1-3-1) [universe]
GNU R biological sequences retrieval and analysis
r-cran-seroincidence (1.0.5-1) [universe]
GNU R seroincidence calculator tool
r-cran-slam (0.1-32-1) [universe]
GNU R sparse lighweight arrays and matrices package
r-cran-spam (1.0-1-1) [universe]
GNU R functions for sparse matrix algebra
r-cran-sparsem (1.7-1) [universe]
GNU R package for basic linear algebra for sparse matrices
r-cran-spatial (7.3-11-1) [universe]
GNU R package for spatial statistics
r-cran-spatstat (1.37-0-1ubuntu1) [universe]
GNU R Spatial Point Pattern analysis, model-fitting, simulation, tests
r-cran-stabledist (0.7-0-1) [universe]
GNU R package for stable distribution functions
r-cran-statmod (1.4.24-1) [universe]
GNU R package providing algorithms and functions for statistical modeling
r-cran-stringi (1.0-1-1) [universe]
GNU R character string processing facilities
r-cran-stringr (1.0.0-1) [universe]
Make it easier to work with strings
r-cran-tcltk2 (1.2-11-1) [universe]
GNU R package for Tcl/Tk additions
r-cran-teachingdemos (2.9-1) [universe]
GNU R Demonstrations for teaching and learning
r-cran-tensor (1.5-1) [universe]
GNU R Tensor product of arrays
r-cran-testthat (0.11.0-1) [universe]
GNU R testsuite
r-cran-tgp (2.4-9-1) [universe]
GNU R package "tgp: Bayesian treed Gaussian process models"
r-cran-th.data (1.0-7-2) [universe]
GNU R package for datasets by Torsten Hothorn
r-cran-truncnorm (1.0-7-1) [universe]
GNU R truncated normal distribution
r-cran-vcdextra (0.6-11-1) [universe]
GNU R package providing extensions and additions to the vcd package
r-cran-vegan (2.3-1-1) [universe]
Community Ecology Package for R
r-cran-vioplot (0.2-2) [universe]
GNU R toolbox for violin plots
r-cran-wdi (2.4-1) [universe]
GNU R package for accessing the World Development Indicators
r-cran-xts (0.9-7-1) [universe]
GNU R package for time series analysis -- xts
r-cran-yaml (2.1.13-4) [universe]
Methods to convert R data to YAML and back
r-omegahat-xmlrpc (0.3-0-1) [universe]
GNU R package for Remote Procedure Calls via XML
r-other-amsmercury (1.3.0-1) [universe]
efficient calculation of accurate masses and abundances of isotopic peaks
r-other-curvefdp (2.0-1) [universe]
estimation of confidence levels for peptide identifications
r-other-iwrlars (0.9-5-1) [universe]
least angle regression, lasso, positive lasso and forward stagewise
r-other-mott-happy.hbrem (2.4-1) [universe]
GNU R package for fine-mapping complex diseases
r-other-nitpick (2.0-1) [universe]
peak identification for mass spectrometry data
r-other-rot (1.5-7build2) [universe]
GNU R package of few tools needed by OpenTURNS
r-revolution-revobase (3.0.0-1ubuntu3) [multiverse]
REvolution Computing R Math Kernel Libraries support
revolution-mkl (3.0.0-1ubuntu1) [multiverse]
REvolution Computing high-performance numeric libraries for R
revolution-r (3.0.0-1ubuntu1) [multiverse]
REvolution Computing R for Ubuntu