软件包: kalign (2.03-1) [universe]
kalign 的相关链接
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下载源码包 kalign:
维护者:
Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.
Original Maintainers (usually from Debian):
- Debian-Med Packaging Team (Mail Archive)
- Charles Plessy
It should generally not be necessary for users to contact the original maintainer.
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Global and progressive multiple sequence alignment
Kalign is a command line tool to perform multiple alignment of biological sequences. It employs the Wu-Manber string-matching algorithm, to improve both the accuracy and speed of the alignment. It uses global, progressive alignment approach, enriched by employing an approximate string-matching algorithm to calculate sequence distances and by incorporating local matches into the otherwise global alignment. In comparisons made by its authors, Kalign was about 10 times faster than ClustalW and, depending on the alignment size, up to 50 times faster than popular iterative methods. It has been published in Lassmann and Sonnhammer, BMC Bioinformatics 2005, 6:298.
Homepage: http://msa.cgb.ki.se