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[ Source: r-bioc-gviz  ]

Package: r-bioc-gviz (1.22.0-1) [universe]

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Similar packages:

Plotting data and annotation information along genomic coordinates

Other Packages Related to r-bioc-gviz

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  • dep: r-api-3.4
    virtual package provided by r-base-core
  • dep: r-base-core (>= 3.4.2-1ubuntu4)
    GNU R core of statistical computation and graphics system
  • dep: r-bioc-annotationdbi (>= 1.27.5)
    GNU R Annotation Database Interface for BioConductor
  • dep: r-bioc-biobase (>= 2.15.3)
    base functions for Bioconductor
  • dep: r-bioc-biocgenerics (>= 0.11.3)
    generic functions for Bioconductor
  • dep: r-bioc-biomart (>= 2.11.0)
    GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)
  • dep: r-bioc-biostrings (>= 2.33.11)
    GNU R string objects representing biological sequences
  • dep: r-bioc-biovizbase (>= 1.13.8)
    GNU R basic graphic utilities for visualization of genomic data
  • dep: r-bioc-bsgenome (>= 1.33.1)
    BioConductor infrastructure for Biostrings-based genome data packages
  • dep: r-bioc-genomeinfodb (>= 1.1.3)
    BioConductor utilities for manipulating chromosome identifiers
  • dep: r-bioc-genomicalignments (>= 1.1.16)
    BioConductor representation and manipulation of short genomic alignments
  • dep: r-bioc-genomicfeatures (>= 1.17.22)
    GNU R tools for making and manipulating transcript centric annotations
  • dep: r-bioc-genomicranges (>= 1.17.20)
    BioConductor representation and manipulation of genomic intervals
  • dep: r-bioc-iranges (>= 1.99.18)
    GNU R low-level containers for storing sets of integer ranges
  • dep: r-bioc-rsamtools (>= 1.17.28)
    GNU R binary alignment (BAM), variant call (BCF), or tabix file import
  • dep: r-bioc-rtracklayer (>= 1.25.13)
    GNU R interface to genome browsers and their annotation tracks
  • dep: r-bioc-s4vectors (>= 0.9.25)
    BioConductor S4 implementation of vectors and lists
  • dep: r-bioc-xvector (>= 0.5.7)
    BioConductor representation and manpulation of external sequences
  • dep: r-cran-digest (>= 0.6.8)
    GNU R package for 'hash digest' of R data structures
  • dep: r-cran-lattice
    GNU R package for 'Trellis' graphics
  • dep: r-cran-latticeextra (>= 0.6-26)
    GNU R package of additional graphical displays based on lattice
  • dep: r-cran-matrixstats (>= 0.8.14)
    GNU R methods that apply to rows and columns of a matrix
  • dep: r-cran-rcolorbrewer
    GNU R package providing suitable color palettes

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