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[ Source: snakemake  ]

Links for snakemake

Ubuntu Resources:

• Bug Reports
• Ubuntu Changelog
• Copyright File

Download Source Package snakemake:

• [snakemake_7.21.0-2.dsc]
• [snakemake_7.21.0.orig.tar.gz]
• [snakemake_7.21.0-2.debian.tar.xz]

Maintainer:

• Ubuntu MOTU Developers (Mail Archive)

Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.

Original Maintainers (usually from Debian):

• Debian Med Packaging Team (Mail Archive)
• Kevin Murray
• Rebecca N. Palmer

It should generally not be necessary for users to contact the original maintainer.

External Resources:

• Homepage [snakemake.readthedocs.io]

Similar packages:

• science-workflow
• python3-biomaj3
• elpa-snakemake
• bundlewrap
• python3-guestfs
• php-letodms-core
• puppet
• debconf
• dpkg
• htcondor
• mailman3

Other Packages Related to snakemake

depends

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suggests

enhances

• dep: ca-certificates

  Common CA certificates

• dep: libjs-bootstrap

  HTML, CSS and JS framework

• dep: libjs-jquery

  JavaScript library for dynamic web applications

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-appdirs

  determining appropriate platform-specific directories (Python 3)

• dep: python3-configargparse

  replacement for argparse with config files and environment variables (Python 3)

• dep: python3-connection-pool

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• dep: python3-datrie

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• dep: python3-docutils

  text processing system for reStructuredText (implemented in Python 3)

• dep: python3-git

  Python library to interact with Git repositories

• dep: python3-humanfriendly

  Python3 library to make user friendly text interfaces

• dep: python3-jinja2 (>= 3.0~)

  small but fast and easy to use stand-alone template engine

• dep: python3-jsonschema

  An(other) implementation of JSON Schema (Draft 3, 4, 6, 7)

• dep: python3-nbformat

  Jupyter notebook format (Python 3)

• dep: python3-pkg-resources

  Package Discovery and Resource Access using pkg_resources

• dep: python3-psutil

  module providing convenience functions for managing processes (Python3)

• dep: python3-pulp (>= 2.0~)

  LP modeler - Python 3.x

• dep: python3-ratelimiter

  simple Python library for limiting the rate of operations

• dep: python3-requests

  elegant and simple HTTP library for Python3, built for human beings

• dep: python3-retry

  easy to use retry decorator

• dep: python3-smart-open (>= 3.0~)

  utils for streaming large files

• dep: python3-stopit

  Timeout control decorator and context manager for Python3

• dep: python3-tabulate

  pretty-print tabular data in Python3

• dep: python3-throttler

  easy throttling with asyncio support for Python3

• dep: python3-toposort

  topological sort algorithm - Python 3 module

• dep: python3-wrapt

  decorators, wrappers and monkey patching. - Python 3.x

• dep: python3-yaml

  YAML parser and emitter for Python3

• rec: cwltool

  Common Workflow Language reference implementation

• rec: imagemagick

  image manipulation programs -- binaries
  also a virtual package provided by graphicsmagick-imagemagick-compat, imagemagick-6.q16

• rec: python3-azure-storage

  Microsoft Azure Storage Library for Python 3.x

• rec: python3-biopython

  Python3 library for bioinformatics

• rec: python3-boto3

  Python interface to Amazon's Web Services - Python 3.x

• rec: python3-botocore

  Low-level, data-driven core of boto 3 (Python 3)

• rec: python3-dropbox

  Official Dropbox API Client (Python3 version)

• rec: python3-flask

  micro web framework based on Werkzeug and Jinja2 - Python 3.x

• rec: python3-ftputil

  high-level FTP client library for Python

• rec: python3-irodsclient

  Client API for iRods

• rec: python3-kubernetes

  Kubernetes Python client - Python 3.x

• rec: python3-pygments

  syntax highlighting package written in Python 3

• rec: python3-tz

  Python3 version of the Olson timezone database

• rec: python3-urllib3

  HTTP library with thread-safe connection pooling for Python3

• rec: python3-yappi

  Yet Another Python Profiler - Python 3.x

• sug: slurm-client

  Slurm client side commands

• sug: snakemake-doc

  documentation for pythonic workflow management system

Download snakemake

Download for all available architectures

Architecture	Package Size	Installed Size	Files
all	259.0 kB	1,446.0 kB	[list of files]