» Ubuntu » Packages » jammy (22.04LTS) » science » spades
jammy  ] [  noble  ] [  questing  ] [  resolute  ] [  stonking  ]
[ Source: spades  ]

Package: spades (3.13.1+dfsg-2ubuntu1) [universe]

Links for spades

Screenshot

Ubuntu Resources:

Download Source Package spades:

Maintainer:

Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.

Original Maintainers (usually from Debian):

  • Debian Med Packaging Team (Mail Archive)
  • Andreas Tille
  • Sascha Steinbiss
  • Michael R. Crusoe
  • Alexandre Mestiashvili

It should generally not be necessary for users to contact the original maintainer.

External Resources:

Similar packages:

genome assembler for single-cell and isolates data sets

Other Packages Related to spades

  • depends
  • recommends
  • suggests
  • enhances
  • dep: bamtools
    toolkit for manipulating BAM (genome alignment) files
  • dep: bwa
    Burrows-Wheeler Aligner
  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
  • dep: libgcc-s1 (>= 4.0)
    GCC support library
  • dep: libgomp1 (>= 6)
    GCC OpenMP (GOMP) support library
  • dep: libhat-trie0
    HAT-trie, an extremely efficient (space and time) modern variant of tries
  • dep: libnlopt0 (>= 2.6.1)
    nonlinear optimization library
  • dep: libssw0 (>= 1.1)
    fast SIMD parallelized implementation of the Smith-Waterman algorithm
  • dep: libstdc++6 (>= 11)
    GNU Standard C++ Library v3
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
  • dep: python3-distutils
    distutils package for Python 3.x
  • dep: python3-joblib
    tools to provide lightweight pipelining in Python
  • dep: python3-yaml
    YAML parser and emitter for Python3
  • dep: samtools
    processing sequence alignments in SAM, BAM and CRAM formats
  • dep: zlib1g (>= 1:1.2.3.3)
    compression library - runtime

Download spades

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 4,967.9 kB22,271.0 kB [list of files]