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[ Source: nanopolish  ]

Package: nanopolish (0.14.0-2) [universe]

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Similar packages:

consensus caller for nanopore sequencing data

Other Packages Related to nanopolish

  • depends
  • recommends
  • suggests
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  • dep: libc6 (>= 2.38)
    GNU C Library: Shared libraries
  • dep: libgcc-s1 (>= 3.3.1) [not armhf]
    GCC support library
    dep: libgcc-s1 (>= 3.5) [armhf]
  • dep: libgomp1 (>= 6)
    GCC OpenMP (GOMP) support library
  • dep: libhdf5-310 (>= 1.14.3)
    HDF5 C runtime files - serial version
  • dep: libhts3t64 (>= 1.17)
    C library for high-throughput sequencing data formats
  • dep: libslow5-0t64 (>= 0.5.1)
    library for reading & writing SLOW5 files
  • dep: libstdc++6 (>= 14)
    GNU Standard C++ Library v3
  • dep: libstreamvbyte0 (>= 0.4.1)
    fast integer compression in C using the StreamVByte codec
  • dep: perl
    Larry Wall's Practical Extraction and Report Language
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
  • dep: zlib1g (>= 1:1.1.4) [not armhf]
    compression library - runtime
    dep: zlib1g (>= 1:1.2.3.3) [armhf]
  • rec: python3-biopython
    Python3 library for bioinformatics
  • rec: python3-pysam
    interface for the SAM/BAM sequence alignment and mapping format (Python 3)
  • sug: make
    utility for directing compilation
  • sug: perl
    Larry Wall's Practical Extraction and Report Language

Download nanopolish

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 2,315.7 kB9,654.0 kB [list of files]
arm64 2,277.9 kB9,538.0 kB [list of files]
armhf 2,270.5 kB9,216.0 kB [list of files]
ppc64el 2,347.1 kB9,794.0 kB [list of files]
riscv64 2,342.6 kB9,418.0 kB [list of files]