[ jammy ] [ noble ] [ questing ] [ resolute ] [ stonking ]

Source Package: paleomix (1.3.10-1) [universe]

Links for paleomix

Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.

It should generally not be necessary for users to contact the original maintainer.

The following binary packages are built from this source package:

paleomix: pipelines and tools for the processing of ancient and modern HTS data

adep: debhelper-compat (= 13)

Package not available
adep: dh-python

Debian helper tools for packaging Python libraries and applications
adep: python3

interactive high-level object-oriented language (default python3 version)
adep: python3-setuptools

Python3 Distutils Enhancements
adep: python3-pytest

Simple, powerful testing in Python3
adep: python3-coloredlogs

colored terminal output for Python 3's logging module
adep: python3-configargparse

replacement for argparse with config files and environment variables
adep: python3-ruamel.yaml

Roundtrip YAML parser/emitter (Python 3 module)
adep: python3-pysam

interface for the SAM/BAM sequence alignment and mapping format (Python 3)
adep: python3-setproctitle

Setproctitle implementation for Python 3
adep: default-jre-headless

Standard Java or Java compatible Runtime (headless)
adep: bowtie2

ultrafast memory-efficient short read aligner
adep: rsync

fast, versatile, remote (and local) file-copying tool
adep: examl

Exascale Maximum Likelihood (ExaML) code for phylogenetic inference
adep: picard-tools

Command line tools to manipulate SAM and BAM files

Debian Package Source Repository (VCS: Git): https://salsa.debian.org/med-team/paleomix.git
Debian Package Source Repository (Browsable): https://salsa.debian.org/med-team/paleomix