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[ Source: hisat2  ]

Links for hisat2

Ubuntu Resources:

• Bug Reports
• Ubuntu Changelog
• Copyright File

Download Source Package hisat2:

• [hisat2_2.2.1-4.dsc]
• [hisat2_2.2.1.orig.tar.gz]
• [hisat2_2.2.1-4.debian.tar.xz]

Maintainer:

• Ubuntu MOTU Developers (Mail Archive)

Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.

Original Maintainers (usually from Debian):

• Debian Med Packaging Team (Mail Archive)
• Michael R. Crusoe

It should generally not be necessary for users to contact the original maintainer.

External Resources:

• Homepage [daehwankimlab.github.io]

Similar packages:

• twopaco
• abacas
• gmap
• mummer
• python3-screed
• dascrubber
• soapaligner
• macs
• hilive
• clustalw
• ssake-examples

Other Packages Related to hisat2

depends

recommends

suggests

enhances

• dep: libc6 (>= 2.34)

  GNU C Library: Shared libraries

• dep: libgcc-s1 (>= 3.3.1) [not armhf, riscv64]

  GCC support library

  dep: libgcc-s1 (>= 3.4) [riscv64]

  dep: libgcc-s1 (>= 3.5) [armhf]

• dep: libstdc++6 (>= 11)

  GNU Standard C++ Library v3

• dep: perl

  Larry Wall's Practical Extraction and Report Language

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• rec: bcftools

  genomic variant calling and manipulation of VCF/BCF files

• rec: python3-hisat2

  Python scripts accompanying hisat2

• rec: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

Download hisat2

Download for all available architectures

Architecture	Package Size	Installed Size	Files
amd64	3,775.9 kB	12,221.0 kB	[list of files]
arm64	3,812.7 kB	11,721.0 kB	[list of files]
armhf	3,903.3 kB	11,861.0 kB	[list of files]
ppc64el	3,992.2 kB	12,425.0 kB	[list of files]
riscv64	4,393.9 kB	12,723.0 kB	[list of files]
s390x	3,727.3 kB	12,513.0 kB	[list of files]