File list of package shasta in questing of architecture amd64

/usr/bin/shasta
/usr/share/doc/shasta/AlignOrientedReads.py
/usr/share/doc/shasta/AlignOrientedReads1.py
/usr/share/doc/shasta/AlignOrientedReads4.py
/usr/share/doc/shasta/AnalyzeAlignmentMatrix.py
/usr/share/doc/shasta/AnalyzeAssemblyGraphBubbles.py
/usr/share/doc/shasta/AnalyzeReadGraph.py
/usr/share/doc/shasta/Assemble.py
/usr/share/doc/shasta/AssembleMarkerGraphEdges.py
/usr/share/doc/shasta/AssembleMarkerGraphVertices.py
/usr/share/doc/shasta/AssembleSegment.py
/usr/share/doc/shasta/CheckConfigurations.py
/usr/share/doc/shasta/CheckMarkerGraphIsStrandSymmetric.py
/usr/share/doc/shasta/CleanupDuplicateMarkers.py
/usr/share/doc/shasta/CleanupRunDirectory.py
/usr/share/doc/shasta/ClusterMarkerGraphEdgeOrientedReads.py
/usr/share/doc/shasta/ColorGfaBySimilarityToSegment.py
/usr/share/doc/shasta/ColorGfaKeySegments.py
/usr/share/doc/shasta/ColorGfaWithTwoReads.py
/usr/share/doc/shasta/ComputeAlignments.py
/usr/share/doc/shasta/ComputeAssemblyStatistics.py
/usr/share/doc/shasta/ComputeMarkerGraphCoverageHistogram.py
/usr/share/doc/shasta/ComputeMarkerGraphVerticesCoverageData.py
/usr/share/doc/shasta/ComputeReadGraphConnectedComponents.py
/usr/share/doc/shasta/ComputeSortedMarkers.py
/usr/share/doc/shasta/Copy.py
/usr/share/doc/shasta/CopyDirectory.py
/usr/share/doc/shasta/CreateAndCleanupMarkerGraph.py
/usr/share/doc/shasta/CreateAssembly.py
/usr/share/doc/shasta/CreateAssemblyGraphEdges.py
/usr/share/doc/shasta/CreateAssemblyGraphVertices.py
/usr/share/doc/shasta/CreateCompressedAssemblyGraph.py
/usr/share/doc/shasta/CreateConfigurationTable.py
/usr/share/doc/shasta/CreateLocalSubgraph.py
/usr/share/doc/shasta/CreateMarkerGraphAndTransitiveReduction.py
/usr/share/doc/shasta/CreateMarkerGraphEdges.py
/usr/share/doc/shasta/CreateMarkerGraphEdgesStrict.py
/usr/share/doc/shasta/CreateMarkerGraphSecondaryEdges.py
/usr/share/doc/shasta/CreateMarkerGraphVertices.py
/usr/share/doc/shasta/CreateModules.py
/usr/share/doc/shasta/CreateReadGraph.py
/usr/share/doc/shasta/CreateReadGraph2.py
/usr/share/doc/shasta/CreateReadGraphMode1.py
/usr/share/doc/shasta/CreateReadGraphUsingPseudoPaths.py
/usr/share/doc/shasta/Detangle.py
/usr/share/doc/shasta/Detangle2.py
/usr/share/doc/shasta/FastqGzToFasta.py
/usr/share/doc/shasta/FastqToFasta.py
/usr/share/doc/shasta/FastqToFastaAll.py
/usr/share/doc/shasta/FindAlignmentCandidatesLowHash0.py
/usr/share/doc/shasta/FindAssemblyGraphBubbles.py
/usr/share/doc/shasta/FindMarkerGraphReverseComplementEdges.py
/usr/share/doc/shasta/FindMarkerGraphReverseComplementVertices.py
/usr/share/doc/shasta/FindMarkers.py
/usr/share/doc/shasta/FlagChimericReads.py
/usr/share/doc/shasta/FlagCrossStrandReadGraphEdges.py
/usr/share/doc/shasta/FlagInconsistentAlignments.py
/usr/share/doc/shasta/FlagPalindromicReads.py
/usr/share/doc/shasta/FlagPrimaryMarkerGraphEdges.py
/usr/share/doc/shasta/GenerateConfig.py.gz
/usr/share/doc/shasta/GenerateFeedback.py.gz
/usr/share/doc/shasta/GenerateRandomHaplotypes.py
/usr/share/doc/shasta/GetConfig.py
/usr/share/doc/shasta/GetReadId.py
/usr/share/doc/shasta/HistogramReadLength.py
/usr/share/doc/shasta/InstallPrerequisites-Ubuntu.sh
/usr/share/doc/shasta/Mode2Assembly-A.py.gz
/usr/share/doc/shasta/Mode2Assembly-B-Prepare.py
/usr/share/doc/shasta/Mode2Assembly-B.py
/usr/share/doc/shasta/Mode3AssembleComponent.py
/usr/share/doc/shasta/Mode3Assembly.py
/usr/share/doc/shasta/PruneMarkerGraphStrongSubgraph.py
/usr/share/doc/shasta/ReadGraphClustering.py
/usr/share/doc/shasta/RemoveReadGraphBridges.py
/usr/share/doc/shasta/RestoreRun.py
/usr/share/doc/shasta/RunAssemblies.py
/usr/share/doc/shasta/SaveRun.py
/usr/share/doc/shasta/SetMarkerGraphEdgeFlags.py
/usr/share/doc/shasta/SetupRunDirectory.py
/usr/share/doc/shasta/SetupSmallRunDirectory.py
/usr/share/doc/shasta/SimpleBayesianConsensusCallerCreateBuiltin.py
/usr/share/doc/shasta/SimplifyMarkerGraph.py
/usr/share/doc/shasta/SplitMarkerGraphSecondaryEdges.py
/usr/share/doc/shasta/StepSequence1.py
/usr/share/doc/shasta/SummarizeAssemblies.py
/usr/share/doc/shasta/Test.py
/usr/share/doc/shasta/TestSimpleBayesianConsensusCaller.py
/usr/share/doc/shasta/TransitiveReduction.py
/usr/share/doc/shasta/TravisCheckBuildMacOS.sh
/usr/share/doc/shasta/TravisCheckBuildUbuntu.sh
/usr/share/doc/shasta/WriteAlignmentCandidates.py
/usr/share/doc/shasta/WriteAssemblyGraph.py
/usr/share/doc/shasta/WriteBadMarkerGraphVertices.py
/usr/share/doc/shasta/WriteFasta.py
/usr/share/doc/shasta/WriteGfa.py
/usr/share/doc/shasta/WriteGfaBothStrands.py
/usr/share/doc/shasta/WriteLocalAlignmentCandidateReads.py
/usr/share/doc/shasta/WriteLocalReadGraphReads.py
/usr/share/doc/shasta/WriteMarkers.py
/usr/share/doc/shasta/WriteOrientedRead.py
/usr/share/doc/shasta/WriteOrientedReadPath.py
/usr/share/doc/shasta/WriteOrientedReadsBySegment.py
/usr/share/doc/shasta/WriteParallelMarkerGraphEdges.py
/usr/share/doc/shasta/WritePseudoPath.py
/usr/share/doc/shasta/WriteRead.py
/usr/share/doc/shasta/WriteReadGraphEdges.py
/usr/share/doc/shasta/WriteReads.py
/usr/share/doc/shasta/changelog.Debian.gz
/usr/share/doc/shasta/comparePhaseAssignments.py.gz
/usr/share/doc/shasta/copyright
/usr/share/doc/shasta/dset64Test.py
/usr/share/doc/shasta/examples/TinyTest.fasta.gz
/usr/share/doc/shasta/examples/conf/HiFi-Oct2021.conf
/usr/share/doc/shasta/examples/conf/Nanopore-Dec2019.conf
/usr/share/doc/shasta/examples/conf/Nanopore-Human-SingleFlowcell-May2022.conf
/usr/share/doc/shasta/examples/conf/Nanopore-Human-SingleFlowcell-Phased-May2022.conf
/usr/share/doc/shasta/examples/conf/Nanopore-Jun2020.conf
/usr/share/doc/shasta/examples/conf/Nanopore-May2022.conf
/usr/share/doc/shasta/examples/conf/Nanopore-Oct2021.conf
/usr/share/doc/shasta/examples/conf/Nanopore-OldGuppy-Sep2020.conf
/usr/share/doc/shasta/examples/conf/Nanopore-Phased-Aug2021.conf
/usr/share/doc/shasta/examples/conf/Nanopore-Phased-Jan2022.conf
/usr/share/doc/shasta/examples/conf/Nanopore-Phased-May2022.conf
/usr/share/doc/shasta/examples/conf/Nanopore-Phased-R10-Fast-Nov2022.conf
/usr/share/doc/shasta/examples/conf/Nanopore-Phased-R10-Slow-Nov2022.conf
/usr/share/doc/shasta/examples/conf/Nanopore-Plants-Apr2021.conf
/usr/share/doc/shasta/examples/conf/Nanopore-R10-Fast-Nov2022.conf
/usr/share/doc/shasta/examples/conf/Nanopore-R10-Slow-Nov2022.conf
/usr/share/doc/shasta/examples/conf/Nanopore-Sep2020.conf
/usr/share/doc/shasta/examples/conf/Nanopore-UL-Dec2019.conf
/usr/share/doc/shasta/examples/conf/Nanopore-UL-Jan2022.conf
/usr/share/doc/shasta/examples/conf/Nanopore-UL-Jun2020.conf
/usr/share/doc/shasta/examples/conf/Nanopore-UL-May2022.conf
/usr/share/doc/shasta/examples/conf/Nanopore-UL-Oct2021.conf
/usr/share/doc/shasta/examples/conf/Nanopore-UL-Phased-Jan2022.conf
/usr/share/doc/shasta/examples/conf/Nanopore-UL-Phased-May2022.conf
/usr/share/doc/shasta/examples/conf/Nanopore-UL-Phased-Nov2022.conf
/usr/share/doc/shasta/examples/conf/Nanopore-UL-Phased-Oct2021.conf
/usr/share/doc/shasta/examples/conf/Nanopore-UL-Sep2020.conf
/usr/share/doc/shasta/examples/conf/Nanopore-UL-iterative-Sep2020.conf
/usr/share/doc/shasta/examples/conf/Nanopore-ncm23-May2024.conf
/usr/share/doc/shasta/examples/conf/PacBio-CCS-Dec2019.conf
/usr/share/doc/shasta/examples/conf/PacBio-CLR-Dec2019.conf
/usr/share/doc/shasta/examples/conf/README.md
/usr/share/doc/shasta/examples/conf/RemoveConflicts.conf
/usr/share/doc/shasta/examples/conf/SimpleBayesianConsensusCaller-10.csv
/usr/share/doc/shasta/examples/conf/SimpleBayesianConsensusCaller-11.csv
/usr/share/doc/shasta/examples/conf/SimpleBayesianConsensusCaller-2.csv
/usr/share/doc/shasta/examples/conf/SimpleBayesianConsensusCaller-3.csv
/usr/share/doc/shasta/examples/conf/SimpleBayesianConsensusCaller-5.csv
/usr/share/doc/shasta/examples/conf/SimpleBayesianConsensusCaller-6.csv
/usr/share/doc/shasta/examples/conf/SimpleBayesianConsensusCaller-7.csv
/usr/share/doc/shasta/examples/conf/SimpleBayesianConsensusCaller-8.csv
/usr/share/doc/shasta/examples/conf/SimpleBayesianConsensusCaller-9.csv
/usr/share/doc/shasta/generateBandageLabelsFromAlignment.py
/usr/share/doc/shasta/testGlobalMsa.py
/usr/share/lintian/overrides/shasta
/usr/share/man/man1/shasta.1.gz