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[ Source: sga  ]

Package: sga (0.10.15-7build2) [universe]

Links for sga

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Download Source Package sga:

Maintainer:

Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.

Original Maintainers (usually from Debian):

  • Debian Med Packaging Team (Mail Archive)
  • Michael R. Crusoe
  • Andreas Tille

It should generally not be necessary for users to contact the original maintainer.

External Resources:

Similar packages:

de novo genome assembler that uses string graphs

Other Packages Related to sga

  • depends
  • recommends
  • suggests
  • enhances
  • dep: libbamtools2.5.3 (>= 2.5.3+dfsg)
    dynamic library for manipulating BAM (genome alignment) files
  • dep: libc6 (>= 2.34) [not armhf, riscv64]
    GNU C Library: Shared libraries
    dep: libc6 (>= 2.38) [armhf, riscv64]
  • dep: libgcc-s1 (>= 3.0) [riscv64]
    GCC support library
    dep: libgcc-s1 (>= 3.3.1) [not armhf, riscv64]
    dep: libgcc-s1 (>= 3.5) [armhf]
  • dep: libgomp1 (>= 6) [not arm64, ppc64el]
    GCC OpenMP (GOMP) support library
  • dep: libstdc++6 (>= 13.1) [arm64, ppc64el]
    GNU Standard C++ Library v3
    dep: libstdc++6 (>= 14) [not arm64, ppc64el]
  • dep: perl
    Larry Wall's Practical Extraction and Report Language
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
  • dep: python3-pysam
    interface for the SAM/BAM sequence alignment and mapping format (Python 3)
  • dep: python3-ruffus
    Python3 computation pipeline library widely used in bioinformatics
  • dep: samtools
    processing sequence alignments in SAM, BAM and CRAM formats
  • dep: zlib1g (>= 1:1.1.4) [not armhf]
    compression library - runtime
    dep: zlib1g (>= 1:1.2.3.3) [armhf]
  • rec: abyss
    de novo, parallel, sequence assembler for short reads

Download sga

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 674.1 kB1,782.0 kB [list of files]
arm64 72.0 kB253.0 kB [list of files]
armhf 641.6 kB1,277.0 kB [list of files]
ppc64el 77.3 kB317.0 kB [list of files]
riscv64 739.9 kB1,618.0 kB [list of files]