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Source Package: picard-tools (3.1.1+dfsg-1) [universe]

Links for picard-tools

Ubuntu Resources:

Maintainer:

Ubuntu MOTU Developers (Mail Archive)

Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.

Original Maintainers (usually from Debian):

Debian Med Packaging Team (Mail Archive)
Charles Plessy
Olivier Sallou
Vincent Danjean
Andreas Tille
Steffen Moeller
Pierre Gruet

It should generally not be necessary for users to contact the original maintainer.

External Resources:

Homepage [broadinstitute.github.io]

The following binary packages are built from this source package:

libpicard-java: Java library to manipulate SAM and BAM files
libpicard-java-doc: Documentation for the java picard library
picard-tools: Command line tools to manipulate SAM and BAM files

Other Packages Related to picard-tools

build-depends

build-depends-indep

adep: default-jdk

Standard Java or Java compatible Development Kit
adep: debhelper-compat (= 13)

Package not available
adep: javahelper

Helper scripts for packaging Java programs
adep: gradle-debian-helper

Helper tools for building Debian packages with Gradle
adep: maven-repo-helper

Helper tools for including Maven metadata in Debian packages
adep: libguava-java

Suite of Google common libraries for Java
adep: libcommons-collections4-java

Apache Commons Collections - Extended Collections API for Java
adep: libcommons-io-java

Common useful IO related classes
adep: libcommons-lang-java

Commons Lang - an extension of the java.lang package
adep: libcommons-lang3-java

Apache Commons Lang utility classes
adep: libcommons-math3-java

Java lightweight mathematics and statistics components
adep: libbarclay-java

Java library to parse command line
adep: libgkl-java

Java library to manipulate SAM and BAM files
adep: libgkl-jni [amd64]

native libraries of Java library to manipulate SAM and BAM files
adep: libgatk-native-bindings-java

library of native bindings for gatk and picard-tools
adep: libhtsjdk-java (>= 3.0.2+dfsg)

Java API for high-throughput sequencing data (HTS) formats
adep: libjoptsimple-java

Command line parsing java library
adep: testng

testing framework for Java
adep: r-base-core

GNU R core of statistical computation and graphics system
adep: default-jdk-doc

Standard Java or Java compatible Development Kit (documentation)
adep: libhtsjdk-java-doc

Documentation for the java HTSJDK library
adep: libjs-jquery

JavaScript library for dynamic web applications

Download picard-tools

File	Size (in kB)	MD5 checksum
picard-tools_3.1.1+dfsg-1.dsc	2.7 kB	6f3bfd0a0f0eb740e24e53011b8d9e8d
picard-tools_3.1.1+dfsg.orig.tar.xz	19,941.3 kB	4c2ab8018a847e95b5495ed38a7d8109
picard-tools_3.1.1+dfsg-1.debian.tar.xz	22.2 kB	f7f70351901d0ef3ae7566d24b007db2

Debian Package Source Repository (VCS: Git): https://salsa.debian.org/med-team/picard-tools.git
Debian Package Source Repository (Browsable): https://salsa.debian.org/med-team/picard-tools