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Quellcode-Paket: cnvkit (0.9.13-2) [universe]

Links für cnvkit

Ubuntu-Ressourcen:

Betreuer:

Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.

Original Maintainers (usually from Debian):

  • Debian Med Packaging Team (E-Mail-Archiv)
  • Michael R. Crusoe
  • Steffen Moeller
  • Olivier Sallou

It should generally not be necessary for users to contact the original maintainer.

Die folgenden Binärpakete werden aus diesem Quellcode-Paket gebaut:
cnvkit
Copy number variant detection from targeted DNA sequencing

Andere Pakete mit Bezug zu cnvkit

  • build-depends
  • build-depends-indep
  • adep: debhelper-compat (= 13)
    Paket nicht verfügbar
  • adep: dh-sequence-python3
    virtuelles Paket, bereitgestellt durch dh-python
  • adep: python3
    interactive high-level object-oriented language (default python3 version)
  • adep: python3-setuptools
    Python3 Distutils Enhancements
  • adep: pybuild-plugin-pyproject
    Debian helper tools for packaging Python libraries using PEP517
  • adep: python3-pytest
    Simple, powerful testing in Python3
  • adep: python3-pyfaidx (>> 0.8.1.3)
    efficient random access to fasta subsequences for Python 3
  • adep: python3-biopython (>> 1.85)
    Python3 library for bioinformatics
  • adep: python3-pandas (>> 2.2.3)
    data structures for "relational" or "labeled" data
  • adep: python3-numpy
    Python library for numerical computations (Python 3)
  • adep: python3-pysam (>> 0.23.0)
    interface for the SAM/BAM sequence alignment and mapping format (Python 3)
  • adep: python3-scipy (>> 1.14.1)
    scientific tools for Python 3
  • adep: python3-matplotlib (>> 3.9)
    Python based plotting system in a style similar to Matlab
  • adep: python3-pomegranate (>= 1.0)
    Fast, flexible and easy to use probabilistic modelling
  • adep: r-bioc-dnacopy
    R package: DNA copy number data analysis
  • adep: poppler-utils
    PDF utilities (based on Poppler)

Download cnvkit

DateiGröße (in kB)MD5-Prüfsumme
cnvkit_0.9.13-2.dsc 2,1 kB fd33719073226ddfac5a6978057d5215
cnvkit_0.9.13.orig.tar.gz 31.555,2 kB 5b1ea83aa32de9f3b7d44c021da11015
cnvkit_0.9.13-2.debian.tar.xz 18,4 kB 86f3ea1cb040213dfdcec518727eebd1
Quellcode-Depot des Debian-Pakets (VCS: Git)
https://salsa.debian.org/med-team/cnvkit.git
Quellcode-Depot des Debian-Pakets (browsable)
https://salsa.debian.org/med-team/cnvkit