packagesPaketin python3-cogent3 tiedostoluettelo jakelussa stonking arkkitehtuurilla amd64
/usr/lib/python3/dist-packages/cogent3-2026.6.2a0.dist-info/INSTALLER /usr/lib/python3/dist-packages/cogent3-2026.6.2a0.dist-info/METADATA /usr/lib/python3/dist-packages/cogent3-2026.6.2a0.dist-info/entry_points.txt /usr/lib/python3/dist-packages/cogent3/__init__.py /usr/lib/python3/dist-packages/cogent3/_dataset/__init__.py /usr/lib/python3/dist-packages/cogent3/_dataset/brca1.fasta /usr/lib/python3/dist-packages/cogent3/_dataset/murphy.tree /usr/lib/python3/dist-packages/cogent3/_plugin.py /usr/lib/python3/dist-packages/cogent3/_version.py /usr/lib/python3/dist-packages/cogent3/align/__init__.py /usr/lib/python3/dist-packages/cogent3/align/align.py /usr/lib/python3/dist-packages/cogent3/align/dp_calculation.py /usr/lib/python3/dist-packages/cogent3/align/indel_model.py /usr/lib/python3/dist-packages/cogent3/align/indel_positions.py /usr/lib/python3/dist-packages/cogent3/align/pairwise.py /usr/lib/python3/dist-packages/cogent3/align/pairwise_pogs_numba.py /usr/lib/python3/dist-packages/cogent3/align/pairwise_seqs_numba.py /usr/lib/python3/dist-packages/cogent3/align/progressive.py /usr/lib/python3/dist-packages/cogent3/align/pycompare.py /usr/lib/python3/dist-packages/cogent3/align/traceback.py /usr/lib/python3/dist-packages/cogent3/app/__init__.py /usr/lib/python3/dist-packages/cogent3/app/_citations.py /usr/lib/python3/dist-packages/cogent3/app/align.py /usr/lib/python3/dist-packages/cogent3/app/composable.py /usr/lib/python3/dist-packages/cogent3/app/data_store.py /usr/lib/python3/dist-packages/cogent3/app/dist.py /usr/lib/python3/dist-packages/cogent3/app/evo.py /usr/lib/python3/dist-packages/cogent3/app/io.py /usr/lib/python3/dist-packages/cogent3/app/result.py /usr/lib/python3/dist-packages/cogent3/app/sample.py /usr/lib/python3/dist-packages/cogent3/app/sqlite_data_store.py /usr/lib/python3/dist-packages/cogent3/app/translate.py /usr/lib/python3/dist-packages/cogent3/app/tree.py /usr/lib/python3/dist-packages/cogent3/app/typing.py /usr/lib/python3/dist-packages/cogent3/cluster/UPGMA.py /usr/lib/python3/dist-packages/cogent3/cluster/__init__.py /usr/lib/python3/dist-packages/cogent3/core/__init__.py /usr/lib/python3/dist-packages/cogent3/core/alignment.py /usr/lib/python3/dist-packages/cogent3/core/alphabet.py /usr/lib/python3/dist-packages/cogent3/core/annotation.py /usr/lib/python3/dist-packages/cogent3/core/annotation_db.py /usr/lib/python3/dist-packages/cogent3/core/genetic_code.py /usr/lib/python3/dist-packages/cogent3/core/info.py /usr/lib/python3/dist-packages/cogent3/core/location.py /usr/lib/python3/dist-packages/cogent3/core/moltype.py /usr/lib/python3/dist-packages/cogent3/core/profile.py /usr/lib/python3/dist-packages/cogent3/core/seq_storage.py /usr/lib/python3/dist-packages/cogent3/core/sequence.py /usr/lib/python3/dist-packages/cogent3/core/seqview.py /usr/lib/python3/dist-packages/cogent3/core/slice_record.py /usr/lib/python3/dist-packages/cogent3/core/table.py /usr/lib/python3/dist-packages/cogent3/core/tree.py /usr/lib/python3/dist-packages/cogent3/data/__init__.py /usr/lib/python3/dist-packages/cogent3/data/energy_params.py /usr/lib/python3/dist-packages/cogent3/data/molecular_weight.py /usr/lib/python3/dist-packages/cogent3/draw/__init__.py /usr/lib/python3/dist-packages/cogent3/draw/annotation.py /usr/lib/python3/dist-packages/cogent3/draw/dendrogram.py /usr/lib/python3/dist-packages/cogent3/draw/dotplot.py /usr/lib/python3/dist-packages/cogent3/draw/drawable.py /usr/lib/python3/dist-packages/cogent3/draw/letter.py /usr/lib/python3/dist-packages/cogent3/draw/logo.py /usr/lib/python3/dist-packages/cogent3/evolve/__init__.py /usr/lib/python3/dist-packages/cogent3/evolve/best_likelihood.py /usr/lib/python3/dist-packages/cogent3/evolve/bootstrap.py /usr/lib/python3/dist-packages/cogent3/evolve/coevolution.py /usr/lib/python3/dist-packages/cogent3/evolve/discrete_markov.py /usr/lib/python3/dist-packages/cogent3/evolve/distance.py /usr/lib/python3/dist-packages/cogent3/evolve/fast_distance.py /usr/lib/python3/dist-packages/cogent3/evolve/likelihood_calculation.py /usr/lib/python3/dist-packages/cogent3/evolve/likelihood_function.py /usr/lib/python3/dist-packages/cogent3/evolve/likelihood_tree.py /usr/lib/python3/dist-packages/cogent3/evolve/likelihood_tree_numba.py /usr/lib/python3/dist-packages/cogent3/evolve/models.py /usr/lib/python3/dist-packages/cogent3/evolve/motif_prob_model.py /usr/lib/python3/dist-packages/cogent3/evolve/ns_substitution_model.py /usr/lib/python3/dist-packages/cogent3/evolve/pairwise_distance_numba.py /usr/lib/python3/dist-packages/cogent3/evolve/parameter_controller.py /usr/lib/python3/dist-packages/cogent3/evolve/predicate.py /usr/lib/python3/dist-packages/cogent3/evolve/simulate.py /usr/lib/python3/dist-packages/cogent3/evolve/solved_models.py /usr/lib/python3/dist-packages/cogent3/evolve/solved_models_numba.py /usr/lib/python3/dist-packages/cogent3/evolve/substitution_calculation.py /usr/lib/python3/dist-packages/cogent3/evolve/substitution_model.py /usr/lib/python3/dist-packages/cogent3/format/__init__.py /usr/lib/python3/dist-packages/cogent3/format/bedgraph.py /usr/lib/python3/dist-packages/cogent3/format/clustal.py /usr/lib/python3/dist-packages/cogent3/format/fasta.py /usr/lib/python3/dist-packages/cogent3/format/gde.py /usr/lib/python3/dist-packages/cogent3/format/nexus.py /usr/lib/python3/dist-packages/cogent3/format/paml.py /usr/lib/python3/dist-packages/cogent3/format/phylip.py /usr/lib/python3/dist-packages/cogent3/format/sequence.py /usr/lib/python3/dist-packages/cogent3/format/table.py /usr/lib/python3/dist-packages/cogent3/format/util.py /usr/lib/python3/dist-packages/cogent3/maths/__init__.py /usr/lib/python3/dist-packages/cogent3/maths/distance_transform.py /usr/lib/python3/dist-packages/cogent3/maths/geometry.py /usr/lib/python3/dist-packages/cogent3/maths/markov.py /usr/lib/python3/dist-packages/cogent3/maths/matrix_exponential_integration.py /usr/lib/python3/dist-packages/cogent3/maths/matrix_exponentiation.py /usr/lib/python3/dist-packages/cogent3/maths/matrix_logarithm.py /usr/lib/python3/dist-packages/cogent3/maths/measure.py /usr/lib/python3/dist-packages/cogent3/maths/optimisers.py /usr/lib/python3/dist-packages/cogent3/maths/period.py /usr/lib/python3/dist-packages/cogent3/maths/period_numba.py /usr/lib/python3/dist-packages/cogent3/maths/scipy_optimisers.py /usr/lib/python3/dist-packages/cogent3/maths/scipy_optimize.py /usr/lib/python3/dist-packages/cogent3/maths/simannealingoptimiser.py /usr/lib/python3/dist-packages/cogent3/maths/solve.py /usr/lib/python3/dist-packages/cogent3/maths/stats/__init__.py /usr/lib/python3/dist-packages/cogent3/maths/stats/contingency.py /usr/lib/python3/dist-packages/cogent3/maths/stats/information_criteria.py /usr/lib/python3/dist-packages/cogent3/maths/stats/jackknife.py /usr/lib/python3/dist-packages/cogent3/maths/stats/kendall.py /usr/lib/python3/dist-packages/cogent3/maths/stats/ks.py /usr/lib/python3/dist-packages/cogent3/maths/stats/number.py /usr/lib/python3/dist-packages/cogent3/maths/stats/period.py /usr/lib/python3/dist-packages/cogent3/maths/stats/test.py /usr/lib/python3/dist-packages/cogent3/maths/util.py /usr/lib/python3/dist-packages/cogent3/parse/__init__.py /usr/lib/python3/dist-packages/cogent3/parse/blast.py /usr/lib/python3/dist-packages/cogent3/parse/blast_xml.py /usr/lib/python3/dist-packages/cogent3/parse/cigar.py /usr/lib/python3/dist-packages/cogent3/parse/cisbp.py /usr/lib/python3/dist-packages/cogent3/parse/clustal.py /usr/lib/python3/dist-packages/cogent3/parse/cogent3_json.py /usr/lib/python3/dist-packages/cogent3/parse/dialign.py /usr/lib/python3/dist-packages/cogent3/parse/ebi.py /usr/lib/python3/dist-packages/cogent3/parse/fasta.py /usr/lib/python3/dist-packages/cogent3/parse/fastq.py /usr/lib/python3/dist-packages/cogent3/parse/gbseq.py /usr/lib/python3/dist-packages/cogent3/parse/gcg.py /usr/lib/python3/dist-packages/cogent3/parse/genbank.py /usr/lib/python3/dist-packages/cogent3/parse/gff.py /usr/lib/python3/dist-packages/cogent3/parse/greengenes.py /usr/lib/python3/dist-packages/cogent3/parse/jaspar.py /usr/lib/python3/dist-packages/cogent3/parse/locuslink.py /usr/lib/python3/dist-packages/cogent3/parse/ncbi_taxonomy.py /usr/lib/python3/dist-packages/cogent3/parse/newick.py /usr/lib/python3/dist-packages/cogent3/parse/nexus.py /usr/lib/python3/dist-packages/cogent3/parse/paml.py /usr/lib/python3/dist-packages/cogent3/parse/paml_matrix.py /usr/lib/python3/dist-packages/cogent3/parse/phylip.py /usr/lib/python3/dist-packages/cogent3/parse/psl.py /usr/lib/python3/dist-packages/cogent3/parse/rdb.py /usr/lib/python3/dist-packages/cogent3/parse/record.py /usr/lib/python3/dist-packages/cogent3/parse/record_finder.py /usr/lib/python3/dist-packages/cogent3/parse/sequence.py /usr/lib/python3/dist-packages/cogent3/parse/table.py /usr/lib/python3/dist-packages/cogent3/parse/tinyseq.py /usr/lib/python3/dist-packages/cogent3/parse/tree.py /usr/lib/python3/dist-packages/cogent3/parse/unigene.py /usr/lib/python3/dist-packages/cogent3/phylo/__init__.py /usr/lib/python3/dist-packages/cogent3/phylo/consensus.py /usr/lib/python3/dist-packages/cogent3/phylo/least_squares.py /usr/lib/python3/dist-packages/cogent3/phylo/maximum_likelihood.py /usr/lib/python3/dist-packages/cogent3/phylo/nj.py /usr/lib/python3/dist-packages/cogent3/phylo/tree_collection.py /usr/lib/python3/dist-packages/cogent3/phylo/tree_distance.py /usr/lib/python3/dist-packages/cogent3/phylo/tree_space.py /usr/lib/python3/dist-packages/cogent3/phylo/util.py /usr/lib/python3/dist-packages/cogent3/py.typed /usr/lib/python3/dist-packages/cogent3/recalculation/__init__.py /usr/lib/python3/dist-packages/cogent3/recalculation/calculation.py /usr/lib/python3/dist-packages/cogent3/recalculation/definition.py /usr/lib/python3/dist-packages/cogent3/recalculation/scope.py /usr/lib/python3/dist-packages/cogent3/recalculation/setting.py /usr/lib/python3/dist-packages/cogent3/util/__init__.py /usr/lib/python3/dist-packages/cogent3/util/checkpointing.py /usr/lib/python3/dist-packages/cogent3/util/deserialise.py /usr/lib/python3/dist-packages/cogent3/util/dict_array.py /usr/lib/python3/dist-packages/cogent3/util/io.py /usr/lib/python3/dist-packages/cogent3/util/misc.py /usr/lib/python3/dist-packages/cogent3/util/parallel.py /usr/lib/python3/dist-packages/cogent3/util/progress_display.py /usr/lib/python3/dist-packages/cogent3/util/transform.py /usr/lib/python3/dist-packages/cogent3/util/union_dict.py /usr/lib/python3/dist-packages/cogent3/util/warning.py /usr/share/doc/python3-cogent3/changelog.Debian.gz /usr/share/doc/python3-cogent3/copyright