packages
[ ソース: lumpy-sv ]
パッケージ: lumpy-sv (0.3.1+dfsg-6) [ports] [universe]
lumpy-sv に関するリンク
Ubuntu の資源:
lumpy-sv ソースパッケージをダウンロード:
メンテナ:
Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.
Original Maintainers (usually from Debian):
- Debian Med Packaging Team (メールアーカイブ)
- Andreas Tille
- Nilesh Patra
It should generally not be necessary for users to contact the original maintainer.
外部の資源:
- ホームページ [github.com]
類似のパッケージ:
general probabilistic framework for structural variant discovery
その他の lumpy-sv 関連パッケージ
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- dep: bamkit
- tools for common BAM file manipulations
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- dep: libbamtools2.5.1 (>= 2.5.1+dfsg)
- dynamic library for manipulating BAM (genome alignment) files
-
- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
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- dep: libgcc-s1 (>= 3.3.1)
- GCC support library
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- dep: libgzstream0 (>= 1.5+dfsg)
- provide functionality of zlib C-library in a C++ iostream
-
- dep: libhts3 (>= 1.10)
- C library for high-throughput sequencing data formats
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- dep: libstdc++6 (>= 11)
- GNU Standard C++ Library v3
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-numpy
- Fast array facility to the Python 3 language
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- dep: python3-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
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- dep: samblaster
- marks duplicates, extracts discordant/split reads
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- dep: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
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- rec: sambamba
- tools for working with SAM/BAM data