packages
[ ソース: augustus ]
パッケージ: augustus (3.5.0+dfsg-4build5) [universe]
augustus に関するリンク
Ubuntu の資源:
augustus ソースパッケージをダウンロード:
- [augustus_3.5.0+dfsg-4build5.dsc]
- [augustus_3.5.0+dfsg.orig.tar.xz]
- [augustus_3.5.0+dfsg-4build5.debian.tar.xz]
メンテナ:
Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.
Original Maintainers (usually from Debian):
- Debian Med Packaging Team (メールアーカイブ)
- Sascha Steinbiss
It should generally not be necessary for users to contact the original maintainer.
外部の資源:
- ホームページ [bioinf.uni-greifswald.de]
類似のパッケージ:
gene prediction in eukaryotic genomes
その他の augustus 関連パッケージ
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- dep: augustus-data
- data files for AUGUSTUS
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- dep: libbamtools2.5.2 (>= 2.5.2+dfsg)
- dynamic library for manipulating BAM (genome alignment) files
-
- dep: libboost-iostreams1.83.0 (>= 1.83.0)
- Boost.Iostreams Library
-
- dep: libc6 (>= 2.38)
- GNU C Library: Shared libraries
-
- dep: libcolamd3 (>= 1:7.0.1)
- column approximate minimum degree ordering library for sparse matrices
-
- dep: libgcc-s1 (>= 3.3.1) [amd64, s390x]
- GCC support library
- dep: libgcc-s1 (>= 3.5) [armhf]
- dep: libgcc-s1 (>= 4.2) [ppc64el]
- dep: libgcc-s1 (>= 4.5) [arm64, riscv64]
-
- dep: libgsl27 (>= 2.7.1)
- GNU Scientific Library (GSL) -- library package
-
- dep: libhts3t64 (>= 1.17)
- C library for high-throughput sequencing data formats
-
- dep: libmysql++3t64
- MySQL C++ library bindings (runtime)
-
- dep: libmysqlclient21 (>= 8.0.11)
- MySQL database client library
-
- dep: libsqlite3-0 (>= 3.5.9)
- SQLite 3 shared library
-
- dep: libstdc++6 (>= 13.1)
- GNU Standard C++ Library v3
-
- rec: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
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- sug: cdbfasta
- Constant DataBase indexing and retrieval tools for multi-FASTA files
-
- sug: diamond-aligner
- accelerated BLAST compatible local sequence aligner
-
- sug: libdbd-mysql-perl
- Perl5 database interface to the MariaDB/MySQL database
-
- sug: libfile-which-perl
- Perl module for searching paths for executable programs
-
- sug: libparallel-forkmanager-perl
- simple parallel processing fork manager for Perl
-
- sug: libyaml-perl
- YAML Ain't Markup Language
-
- sug: python3-biopython
- Python3 library for bioinformatics