packages
[ Source: lumpy-sv ]
Package: lumpy-sv (0.3.1+dfsg-8.1) [universe]
Links for lumpy-sv
Ubuntu Resources:
Download Source Package lumpy-sv:
- [lumpy-sv_0.3.1+dfsg-8.1.dsc]
- [lumpy-sv_0.3.1+dfsg.orig.tar.xz]
- [lumpy-sv_0.3.1+dfsg-8.1.debian.tar.xz]
Maintainer:
Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.
Original Maintainers (usually from Debian):
- Debian Med Packaging Team (Mail Archive)
- Andreas Tille
It should generally not be necessary for users to contact the original maintainer.
External Resources:
- Homepage [github.com]
Similar packages:
general probabilistic framework for structural variant discovery
Other Packages Related to lumpy-sv
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- dep: bamkit
- tools for common BAM file manipulations
-
- dep: libbamtools2.5.3 (>= 2.5.3+dfsg)
- dynamic library for manipulating BAM (genome alignment) files
-
- dep: libc6 (>= 2.38)
- GNU C Library: Shared libraries
-
- dep: libgcc-s1 (>= 3.3.1)
- GCC support library
-
- dep: libgzstream0 (>= 1.5+git20171107.9a20658)
- provide functionality of zlib C-library in a C++ iostream
-
- dep: libhts3t64 (>= 1.17)
- C library for high-throughput sequencing data formats
-
- dep: libstdc++6 (>= 13.1)
- GNU Standard C++ Library v3
-
- dep: python3
- interactive high-level object-oriented language (default python3 version)
-
- dep: python3-numpy
- Python library for numerical computations (Python 3)
-
- dep: python3-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
-
- dep: samblaster
- marks duplicates, extracts discordant/split reads
-
- dep: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
-
- rec: sambamba
- tools for working with SAM/BAM data
Download lumpy-sv
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 144.4 kB | 452.0 kB | [list of files] |