packagesСписок файлов пакета bedtools-test в resolute для архитектуры all
/usr/share/bedtools/data/aluY.chr1.bed.gz /usr/share/bedtools/data/gerp.chr1.bed.gz /usr/share/bedtools/data/knownGene.hg18.chr21.bed /usr/share/bedtools/data/knownGene.hg18.chr21.short.bed /usr/share/bedtools/data/refseq.chr1.exons.bed.gz /usr/share/bedtools/data/simpleRepeats.chr1.bed.gz /usr/share/bedtools/test/bamtobed/extra-long-header.sam.gz /usr/share/bedtools/test/bamtobed/numeric_tag.sam /usr/share/bedtools/test/bamtobed/one_block.sam /usr/share/bedtools/test/bamtobed/test-bamtobed.sh /usr/share/bedtools/test/bamtobed/three_blocks.sam /usr/share/bedtools/test/bamtobed/two_blocks.sam /usr/share/bedtools/test/bamtobed/two_blocks_w_D.sam /usr/share/bedtools/test/bamtofastq/golden.fq /usr/share/bedtools/test/bamtofastq/golden.fq2 /usr/share/bedtools/test/bamtofastq/test-bamtofastq.sh /usr/share/bedtools/test/bamtofastq/test.sam /usr/share/bedtools/test/bamtofastq/test2.sam /usr/share/bedtools/test/bed12tobed6/bed6.bed /usr/share/bedtools/test/bed12tobed6/one_blocks.bed /usr/share/bedtools/test/bed12tobed6/test-bed12tobed6.sh /usr/share/bedtools/test/bed12tobed6/three_blocks.bed /usr/share/bedtools/test/bed12tobed6/two_blocks.bed /usr/share/bedtools/test/bedtobam/chrsize.tmp /usr/share/bedtools/test/bedtobam/test-bedtobam.sh /usr/share/bedtools/test/bigchroms/abig.bed /usr/share/bedtools/test/bigchroms/big4.bed /usr/share/bedtools/test/bigchroms/big4c.bed /usr/share/bedtools/test/bigchroms/bigx.bed /usr/share/bedtools/test/bigchroms/make-big-chrom.py /usr/share/bedtools/test/bigchroms/test-bigchroms.sh /usr/share/bedtools/test/closest/a.bed /usr/share/bedtools/test/closest/a.names.bed /usr/share/bedtools/test/closest/a2.bed /usr/share/bedtools/test/closest/b-one-bp-closer.bed /usr/share/bedtools/test/closest/b.bed /usr/share/bedtools/test/closest/b.names.bed /usr/share/bedtools/test/closest/b2.bed /usr/share/bedtools/test/closest/bug157_a.bed /usr/share/bedtools/test/closest/bug157_b.bed /usr/share/bedtools/test/closest/bug281_a.flip.medium.bed /usr/share/bedtools/test/closest/bug281_a.medium.bed /usr/share/bedtools/test/closest/bug281_b.bed /usr/share/bedtools/test/closest/bug281_b.flip.bed /usr/share/bedtools/test/closest/close-a.bed /usr/share/bedtools/test/closest/close-b.bed /usr/share/bedtools/test/closest/d.bed /usr/share/bedtools/test/closest/d4.bed /usr/share/bedtools/test/closest/d_d1F.bed /usr/share/bedtools/test/closest/d_d1R.bed /usr/share/bedtools/test/closest/d_d2F.bed /usr/share/bedtools/test/closest/d_d2R.bed /usr/share/bedtools/test/closest/d_id.bed /usr/share/bedtools/test/closest/d_iu.bed /usr/share/bedtools/test/closest/d_q1.bed /usr/share/bedtools/test/closest/d_q2.bed /usr/share/bedtools/test/closest/dmr.bed /usr/share/bedtools/test/closest/islands.2.bed /usr/share/bedtools/test/closest/islands.bed /usr/share/bedtools/test/closest/kclosest/bug471_a.bed /usr/share/bedtools/test/closest/kclosest/bug471_b.bed /usr/share/bedtools/test/closest/kclosest/d1.bed /usr/share/bedtools/test/closest/kclosest/d2.bed /usr/share/bedtools/test/closest/kclosest/d3.bed /usr/share/bedtools/test/closest/kclosest/q1.bed /usr/share/bedtools/test/closest/kclosest/q2.bed /usr/share/bedtools/test/closest/kclosest/test-kclosest.sh /usr/share/bedtools/test/closest/mdb1.bed /usr/share/bedtools/test/closest/mdb2.bed /usr/share/bedtools/test/closest/mdb3.bed /usr/share/bedtools/test/closest/mq1.bed /usr/share/bedtools/test/closest/null_a.bed /usr/share/bedtools/test/closest/null_b.bed /usr/share/bedtools/test/closest/null_c.bed /usr/share/bedtools/test/closest/shores.bed /usr/share/bedtools/test/closest/sortAndNaming/alpha_all.bed /usr/share/bedtools/test/closest/sortAndNaming/alpha_missing.bed /usr/share/bedtools/test/closest/sortAndNaming/db1_gls.bed /usr/share/bedtools/test/closest/sortAndNaming/db1_leadingZero.txt /usr/share/bedtools/test/closest/sortAndNaming/db1_noChr.bed /usr/share/bedtools/test/closest/sortAndNaming/db1_num.bed /usr/share/bedtools/test/closest/sortAndNaming/db2_num.bed /usr/share/bedtools/test/closest/sortAndNaming/db2_numBackwards.bed /usr/share/bedtools/test/closest/sortAndNaming/db3_numBackwards.bed /usr/share/bedtools/test/closest/sortAndNaming/num_all.bed /usr/share/bedtools/test/closest/sortAndNaming/num_missing.bed /usr/share/bedtools/test/closest/sortAndNaming/q1_gls.bed /usr/share/bedtools/test/closest/sortAndNaming/q1_num.bed /usr/share/bedtools/test/closest/sortAndNaming/q1a_num.bed /usr/share/bedtools/test/closest/sortAndNaming/sdb1.bed /usr/share/bedtools/test/closest/sortAndNaming/sq1.bed /usr/share/bedtools/test/closest/sortAndNaming/test-sort-and-naming.sh /usr/share/bedtools/test/closest/strand-test-a.bed /usr/share/bedtools/test/closest/strand-test-b.bed /usr/share/bedtools/test/closest/strand-test-c.bed /usr/share/bedtools/test/closest/strand-test-d.bed /usr/share/bedtools/test/closest/test-closest.sh /usr/share/bedtools/test/closest/tfbs.bed /usr/share/bedtools/test/cluster/in.bed /usr/share/bedtools/test/cluster/test-cluster.sh /usr/share/bedtools/test/complement/issue_503.bed /usr/share/bedtools/test/complement/issue_503.genome /usr/share/bedtools/test/complement/test-complement.sh /usr/share/bedtools/test/coverage/a.bed /usr/share/bedtools/test/coverage/b.bed /usr/share/bedtools/test/coverage/c.bed /usr/share/bedtools/test/coverage/chr_0-100.bed /usr/share/bedtools/test/coverage/one_block.bam.bai /usr/share/bedtools/test/coverage/one_block.sam /usr/share/bedtools/test/coverage/sam-w-del.bam.bai /usr/share/bedtools/test/coverage/sam-w-del.sam /usr/share/bedtools/test/coverage/test-coverage.sh /usr/share/bedtools/test/coverage/three_blocks.bam.bai /usr/share/bedtools/test/coverage/three_blocks.sam /usr/share/bedtools/test/coverage/three_blocks_match.bam /usr/share/bedtools/test/coverage/three_blocks_match.bed /usr/share/bedtools/test/coverage/three_blocks_match_1bp.bed /usr/share/bedtools/test/coverage/three_blocks_nomatch.bed /usr/share/bedtools/test/coverage/two_blocks.bam.bai /usr/share/bedtools/test/coverage/two_blocks.sam /usr/share/bedtools/test/coverage/x.bed /usr/share/bedtools/test/coverage/y.bed /usr/share/bedtools/test/expand/expand.txt /usr/share/bedtools/test/expand/test-expand.sh /usr/share/bedtools/test/fisher/README.md /usr/share/bedtools/test/fisher/a.bed /usr/share/bedtools/test/fisher/a_merge.bed /usr/share/bedtools/test/fisher/b.bed /usr/share/bedtools/test/fisher/cmp.sh /usr/share/bedtools/test/fisher/dm6.fai /usr/share/bedtools/test/fisher/get.sh /usr/share/bedtools/test/fisher/issue954.genome /usr/share/bedtools/test/fisher/issue954_a.bed /usr/share/bedtools/test/fisher/issue954_b.bed /usr/share/bedtools/test/fisher/plot.py /usr/share/bedtools/test/fisher/shuf.sh /usr/share/bedtools/test/fisher/sim.py /usr/share/bedtools/test/fisher/t.500.genome /usr/share/bedtools/test/fisher/t.60.genome /usr/share/bedtools/test/fisher/test-fisher.sh /usr/share/bedtools/test/fisher/test.bed /usr/share/bedtools/test/fisher/tumor.gff /usr/share/bedtools/test/flank/a.bed /usr/share/bedtools/test/flank/test-flank.sh /usr/share/bedtools/test/flank/tiny.genome /usr/share/bedtools/test/general/a.chromheader.bed /usr/share/bedtools/test/general/a.trackheader.bed /usr/share/bedtools/test/general/empty.bed /usr/share/bedtools/test/general/hg19.fa.fai /usr/share/bedtools/test/general/non-empty.bed.gz /usr/share/bedtools/test/general/t.bed /usr/share/bedtools/test/general/test-general.sh /usr/share/bedtools/test/genomecov/chip.sam /usr/share/bedtools/test/genomecov/empty.bam /usr/share/bedtools/test/genomecov/empty.cram /usr/share/bedtools/test/genomecov/genome.txt /usr/share/bedtools/test/genomecov/mk-deep.py /usr/share/bedtools/test/genomecov/one_block.sam /usr/share/bedtools/test/genomecov/pair-chip.sam /usr/share/bedtools/test/genomecov/sam-w-del.sam /usr/share/bedtools/test/genomecov/test-genomecov.sh /usr/share/bedtools/test/genomecov/test_ref.fa /usr/share/bedtools/test/genomecov/test_ref.fa.fai /usr/share/bedtools/test/genomecov/three_blocks.sam /usr/share/bedtools/test/genomecov/three_blocks_match.bed /usr/share/bedtools/test/genomecov/three_blocks_match_1bp.bed /usr/share/bedtools/test/genomecov/three_blocks_nomatch.bed /usr/share/bedtools/test/genomecov/two_blocks.sam /usr/share/bedtools/test/genomecov/y.bam /usr/share/bedtools/test/genomecov/y.bed /usr/share/bedtools/test/getfasta/blocks.bed /usr/share/bedtools/test/getfasta/rna.bed /usr/share/bedtools/test/getfasta/rna.fasta /usr/share/bedtools/test/getfasta/rna.fasta.fai /usr/share/bedtools/test/getfasta/t.bed /usr/share/bedtools/test/getfasta/t.fa /usr/share/bedtools/test/getfasta/t.fa.fai /usr/share/bedtools/test/getfasta/t.fa.gz /usr/share/bedtools/test/getfasta/t.fa.gz.fai /usr/share/bedtools/test/getfasta/t.fa.gz.gzi /usr/share/bedtools/test/getfasta/t_fH.fa /usr/share/bedtools/test/getfasta/t_fH.fa.fai /usr/share/bedtools/test/getfasta/test-getfasta.sh /usr/share/bedtools/test/getfasta/test.iupac.bed /usr/share/bedtools/test/getfasta/test.iupac.fa /usr/share/bedtools/test/groupby/a_vcfSVtest.vcf /usr/share/bedtools/test/groupby/bug569_problem.txt /usr/share/bedtools/test/groupby/gdc.bam /usr/share/bedtools/test/groupby/noPosvalues.header.bed /usr/share/bedtools/test/groupby/test-groupby.sh /usr/share/bedtools/test/groupby/test.bed /usr/share/bedtools/test/groupby/values3.7fields.header.bed /usr/share/bedtools/test/groupby/values3.header.bed /usr/share/bedtools/test/groupby/values3.no_header.bed /usr/share/bedtools/test/groupby/values3.unmarked_header.bed /usr/share/bedtools/test/groupby/values3.unmarked_header.bed.2 /usr/share/bedtools/test/groupby/values3_case.header.bed /usr/share/bedtools/test/intersect/a.bam /usr/share/bedtools/test/intersect/a.bed /usr/share/bedtools/test/intersect/a.cram /usr/share/bedtools/test/intersect/a.issue311.bed /usr/share/bedtools/test/intersect/aVSb.bam /usr/share/bedtools/test/intersect/aWithHeaderVsB.txt /usr/share/bedtools/test/intersect/a_bgzipped.bed.gz /usr/share/bedtools/test/intersect/a_gzipped.bed.gz /usr/share/bedtools/test/intersect/a_testZeroLen.bed /usr/share/bedtools/test/intersect/a_vcfSVtest.vcf /usr/share/bedtools/test/intersect/a_withLargeHeader.bed /usr/share/bedtools/test/intersect/a_withLargeHeader_bgzipped.bed.gz /usr/share/bedtools/test/intersect/a_withLargeHeader_gzipped.bed.gz /usr/share/bedtools/test/intersect/a_with_bothUnmapped.bam /usr/share/bedtools/test/intersect/b.bed /usr/share/bedtools/test/intersect/b.cram /usr/share/bedtools/test/intersect/b.issue311.gff /usr/share/bedtools/test/intersect/b.issue311.vcf /usr/share/bedtools/test/intersect/b_testZeroLen.bed /usr/share/bedtools/test/intersect/b_vcfSVtest.vcf /usr/share/bedtools/test/intersect/bed3.bed /usr/share/bedtools/test/intersect/bed4.bed /usr/share/bedtools/test/intersect/bed5.bed /usr/share/bedtools/test/intersect/bed6.bed /usr/share/bedtools/test/intersect/bed6.strand.bed /usr/share/bedtools/test/intersect/bed6.strand2.bed /usr/share/bedtools/test/intersect/bedplus.bed /usr/share/bedtools/test/intersect/blocks.bed12 /usr/share/bedtools/test/intersect/bug150_a.bed /usr/share/bedtools/test/intersect/bug150_b.bed /usr/share/bedtools/test/intersect/bug167_strandSweep.bed /usr/share/bedtools/test/intersect/bug187_a.bed /usr/share/bedtools/test/intersect/bug187_b.bed /usr/share/bedtools/test/intersect/bug223_d.vcf /usr/share/bedtools/test/intersect/bug223_e.vcf /usr/share/bedtools/test/intersect/bug223_f.vcf /usr/share/bedtools/test/intersect/bug223_sv1_a.vcf /usr/share/bedtools/test/intersect/bug223_sv1_b.vcf /usr/share/bedtools/test/intersect/bug44_a.vcf.gz /usr/share/bedtools/test/intersect/bug44_b.bed /usr/share/bedtools/test/intersect/c.bed /usr/share/bedtools/test/intersect/chromOrderA.bed /usr/share/bedtools/test/intersect/chromOrderB.bed /usr/share/bedtools/test/intersect/chromsOutOfOrder.bed /usr/share/bedtools/test/intersect/d.bed /usr/share/bedtools/test/intersect/dosLineCharWithExtraTab_b.bed /usr/share/bedtools/test/intersect/dosLineChar_a.bed /usr/share/bedtools/test/intersect/e.bed /usr/share/bedtools/test/intersect/exons.issue750.bed /usr/share/bedtools/test/intersect/foo /usr/share/bedtools/test/intersect/gdc.bam /usr/share/bedtools/test/intersect/gdc.gff /usr/share/bedtools/test/intersect/gdc_exp /usr/share/bedtools/test/intersect/gdc_one.bed /usr/share/bedtools/test/intersect/headerOnly.vcf /usr/share/bedtools/test/intersect/human.hg19.genome /usr/share/bedtools/test/intersect/human.hg19.vSort.genome /usr/share/bedtools/test/intersect/issue-919.bed /usr/share/bedtools/test/intersect/issue-919.region.bed /usr/share/bedtools/test/intersect/issue_773_b.bed /usr/share/bedtools/test/intersect/issue_773_y.bed /usr/share/bedtools/test/intersect/j1.bed /usr/share/bedtools/test/intersect/jim.bed /usr/share/bedtools/test/intersect/jim.vcf /usr/share/bedtools/test/intersect/large_a.bed /usr/share/bedtools/test/intersect/large_b.bed /usr/share/bedtools/test/intersect/mapped_and_unmapped.sam /usr/share/bedtools/test/intersect/multi_intersect/d1.bed /usr/share/bedtools/test/intersect/multi_intersect/d2.bed /usr/share/bedtools/test/intersect/multi_intersect/d3.bed /usr/share/bedtools/test/intersect/multi_intersect/d4.bed /usr/share/bedtools/test/intersect/multi_intersect/d5.bed /usr/share/bedtools/test/intersect/multi_intersect/d6.bed /usr/share/bedtools/test/intersect/multi_intersect/d7.bed /usr/share/bedtools/test/intersect/multi_intersect/d8.bed /usr/share/bedtools/test/intersect/multi_intersect/d9.bed /usr/share/bedtools/test/intersect/multi_intersect/g.bed /usr/share/bedtools/test/intersect/multi_intersect/query.bed /usr/share/bedtools/test/intersect/multi_intersect/query2.bed /usr/share/bedtools/test/intersect/multi_intersect/query3.bed /usr/share/bedtools/test/intersect/multi_intersect/test-multi_intersect.sh /usr/share/bedtools/test/intersect/new_test-intersect.sh /usr/share/bedtools/test/intersect/nonamecheck_a.bed /usr/share/bedtools/test/intersect/nonamecheck_b.bed /usr/share/bedtools/test/intersect/notexthdr.bam /usr/share/bedtools/test/intersect/null_a.bed /usr/share/bedtools/test/intersect/null_b.bed /usr/share/bedtools/test/intersect/null_c.bed /usr/share/bedtools/test/intersect/oneRecordNoNewline.bed /usr/share/bedtools/test/intersect/oneUnmapped.bam /usr/share/bedtools/test/intersect/one_block.sam /usr/share/bedtools/test/intersect/performanceTest.sh /usr/share/bedtools/test/intersect/queryUnmappedMateMappedCoordsInvalid.bam /usr/share/bedtools/test/intersect/recordsOutOfOrder.bed /usr/share/bedtools/test/intersect/sortAndNaming/alpha_all.bed /usr/share/bedtools/test/intersect/sortAndNaming/alpha_missing.bed /usr/share/bedtools/test/intersect/sortAndNaming/bigTests/2.21_500Kvs500K.txt /usr/share/bedtools/test/intersect/sortAndNaming/bigTests/2.21_5v5.txt /usr/share/bedtools/test/intersect/sortAndNaming/bigTests/2.21_chr1.txt /usr/share/bedtools/test/intersect/sortAndNaming/bigTests/curr500Kvs500K.txt /usr/share/bedtools/test/intersect/sortAndNaming/bigTests/curr5v5.txt /usr/share/bedtools/test/intersect/sortAndNaming/bigTests/currChr1.txt /usr/share/bedtools/test/intersect/sortAndNaming/bigTests/db500K.bed /usr/share/bedtools/test/intersect/sortAndNaming/bigTests/dbchr1.bed /usr/share/bedtools/test/intersect/sortAndNaming/bigTests/diffs.txt /usr/share/bedtools/test/intersect/sortAndNaming/bigTests/q500K.bed /usr/share/bedtools/test/intersect/sortAndNaming/bigTests/qchr1.bed /usr/share/bedtools/test/intersect/sortAndNaming/db1_gls.bed /usr/share/bedtools/test/intersect/sortAndNaming/db1_leadingZero.txt /usr/share/bedtools/test/intersect/sortAndNaming/db1_noChr.bed /usr/share/bedtools/test/intersect/sortAndNaming/db1_num.bed /usr/share/bedtools/test/intersect/sortAndNaming/db2_num.bed /usr/share/bedtools/test/intersect/sortAndNaming/db2_numBackwards.bed /usr/share/bedtools/test/intersect/sortAndNaming/db3_numBackwards.bed /usr/share/bedtools/test/intersect/sortAndNaming/diffs.txt /usr/share/bedtools/test/intersect/sortAndNaming/exp1 /usr/share/bedtools/test/intersect/sortAndNaming/num_all.bed /usr/share/bedtools/test/intersect/sortAndNaming/num_missing.bed /usr/share/bedtools/test/intersect/sortAndNaming/q1_gls.bed /usr/share/bedtools/test/intersect/sortAndNaming/q1_num.bed /usr/share/bedtools/test/intersect/sortAndNaming/q1a_num.bed /usr/share/bedtools/test/intersect/sortAndNaming/sdb1.bed /usr/share/bedtools/test/intersect/sortAndNaming/sq1.bed /usr/share/bedtools/test/intersect/sortAndNaming/test-sort-and-naming.sh /usr/share/bedtools/test/intersect/split.issue750.bam /usr/share/bedtools/test/intersect/split.issue750.sam /usr/share/bedtools/test/intersect/splitBug155_a.bed /usr/share/bedtools/test/intersect/splitBug155_b.bed /usr/share/bedtools/test/intersect/strand_with_star.a.bed /usr/share/bedtools/test/intersect/strand_with_star.b.bed /usr/share/bedtools/test/intersect/svlen.vcf /usr/share/bedtools/test/intersect/test-intersect.sh /usr/share/bedtools/test/intersect/test_ref.fa /usr/share/bedtools/test/intersect/test_ref.fa.fai /usr/share/bedtools/test/intersect/three_blocks.sam /usr/share/bedtools/test/intersect/three_blocks_match.bam /usr/share/bedtools/test/intersect/three_blocks_match.bed /usr/share/bedtools/test/intersect/three_blocks_match_1bp.bed /usr/share/bedtools/test/intersect/three_blocks_nomatch.bed /usr/share/bedtools/test/intersect/two_blocks.sam /usr/share/bedtools/test/intersect/two_blocks_partial.bam /usr/share/bedtools/test/intersect/two_blocks_partial.bam.bai /usr/share/bedtools/test/intersect/two_blocks_partial.bed /usr/share/bedtools/test/intersect/ultra-long-bed4.bed /usr/share/bedtools/test/intersect/x.bam /usr/share/bedtools/test/intersect/x.bed /usr/share/bedtools/test/intersect/y.bed /usr/share/bedtools/test/jaccard/a.bam /usr/share/bedtools/test/jaccard/a.bed /usr/share/bedtools/test/jaccard/a645.bed /usr/share/bedtools/test/jaccard/aMixedStrands.bed /usr/share/bedtools/test/jaccard/b.bed /usr/share/bedtools/test/jaccard/b645.bed /usr/share/bedtools/test/jaccard/bMixedStrands.bed /usr/share/bedtools/test/jaccard/c.bed /usr/share/bedtools/test/jaccard/e.bed /usr/share/bedtools/test/jaccard/long.bed /usr/share/bedtools/test/jaccard/short.bed /usr/share/bedtools/test/jaccard/test-jaccard.sh /usr/share/bedtools/test/jaccard/three_blocks_match.bam /usr/share/bedtools/test/jaccard/three_blocks_match.bed /usr/share/bedtools/test/makewindows/a.19bp.bed /usr/share/bedtools/test/makewindows/a.20bp.bed /usr/share/bedtools/test/makewindows/a.33bp.bed /usr/share/bedtools/test/makewindows/input.bed /usr/share/bedtools/test/makewindows/test-makewindows.sh /usr/share/bedtools/test/map/.RData /usr/share/bedtools/test/map/.Rhistory 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