» Ubuntu » Packages » noble (24.04LTS) » Source » misc » augur
jammy  ] [  noble  ] [  plucky  ] [  questing  ] [  resolute  ]

Source Package: augur (24.2.2-1) [universe]

Links for augur

Ubuntu Resources:

Maintainer:

Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.

Original Maintainers (usually from Debian):

  • Debian Med Packaging Team (Mail Archive)
  • Andreas Tille
  • Étienne Mollier

It should generally not be necessary for users to contact the original maintainer.

External Resources:

The following binary packages are built from this source package:
augur
pipeline components for real-time virus analysis

Other Packages Related to augur

  • build-depends
  • build-depends-indep
  • adep: debhelper-compat (= 13)
    Package not available
  • adep: dh-sequence-python3
    virtual package provided by dh-python
  • adep: flake8
    code checker using pycodestyle and pyflakes
  • adep: mafft
    Multiple alignment program for amino acid or nucleotide sequences
  • adep: mypy
    optional static typing for Python
  • adep: python3-all
    package depending on all supported Python 3 runtime versions
  • adep: python3-setuptools
    Python3 Distutils Enhancements
  • adep: python3-pytest
    Simple, powerful testing in Python3
  • adep: python3-pytest-mock
    Thin wrapper around mock for easier use with pytest (Python 3 module)
  • adep: python3-biopython
    Python3 library for bioinformatics
  • adep: python3-jsonschema
    An(other) implementation of JSON Schema (Draft 3, 4, 6, 7)
  • adep: python3-networkx
    tool to create, manipulate and study complex networks (Python3)
  • adep: python3-packaging
    core utilities for python3 packages
  • adep: python3-pandas
    data structures for "relational" or "labeled" data
  • adep: python3-pyfastx
    fast random access to sequences from FASTA/Q file - python3 module
  • adep: python3-treetime (>= 0.9.4)
    inference of time stamped phylogenies and ancestral reconstruction (Python 3)
  • adep: python3-typeshed
    collection of library stubs for Python, with static types
  • adep: python3-freezegun
    Python3 library to mock the datetime module in unit testing
  • adep: python3-isodate
    ISO 8601 date/time/duration parser and formatter (Python 3 module)
  • adep: python3-zstandard
    Python bindings for interfacing with Zstandard library
  • adep: vcftools
    Collection of tools to work with VCF files
  • adep: python3-xopen (>= 1.7.0-1~)
    Python3 module to open compressed files transparently

Download augur

FileSize (in kB)MD5 checksum
augur_24.2.2-1.dsc 2.7 kB 9f6328716cb248784fb7f56dec90d2cc
augur_24.2.2.orig.tar.gz 6,585.9 kB 63c436d75722f18d875363b2c9d1ae71
augur_24.2.2-1.debian.tar.xz 15.9 kB a4a37de2e9de75dde99199ffe34d2778
Debian Package Source Repository (VCS: Git)
https://salsa.debian.org/med-team/augur.git
Debian Package Source Repository (Browsable)
https://salsa.debian.org/med-team/augur