packagesFile list of package python3-bcbio in stonking of architecture all
/usr/lib/python3/dist-packages/bcbio/__init__.py /usr/lib/python3/dist-packages/bcbio/bam/__init__.py /usr/lib/python3/dist-packages/bcbio/bam/callable.py /usr/lib/python3/dist-packages/bcbio/bam/counts.py /usr/lib/python3/dist-packages/bcbio/bam/coverage.py /usr/lib/python3/dist-packages/bcbio/bam/cram.py /usr/lib/python3/dist-packages/bcbio/bam/fasta.py /usr/lib/python3/dist-packages/bcbio/bam/fastq.py /usr/lib/python3/dist-packages/bcbio/bam/readstats.py /usr/lib/python3/dist-packages/bcbio/bam/ref.py /usr/lib/python3/dist-packages/bcbio/bam/skewer.py /usr/lib/python3/dist-packages/bcbio/bam/trim.py /usr/lib/python3/dist-packages/bcbio/bed/__init__.py /usr/lib/python3/dist-packages/bcbio/broad/__init__.py /usr/lib/python3/dist-packages/bcbio/broad/metrics.py /usr/lib/python3/dist-packages/bcbio/broad/picardrun.py /usr/lib/python3/dist-packages/bcbio/chipseq/__init__.py /usr/lib/python3/dist-packages/bcbio/chipseq/antibodies.py /usr/lib/python3/dist-packages/bcbio/chipseq/atac.py /usr/lib/python3/dist-packages/bcbio/chipseq/macs2.py /usr/lib/python3/dist-packages/bcbio/chipseq/peaks.py /usr/lib/python3/dist-packages/bcbio/cwl/__init__.py /usr/lib/python3/dist-packages/bcbio/cwl/create.py /usr/lib/python3/dist-packages/bcbio/cwl/cwlutils.py /usr/lib/python3/dist-packages/bcbio/cwl/defs.py /usr/lib/python3/dist-packages/bcbio/cwl/hpc.py /usr/lib/python3/dist-packages/bcbio/cwl/inspect.py /usr/lib/python3/dist-packages/bcbio/cwl/main.py /usr/lib/python3/dist-packages/bcbio/cwl/tool.py /usr/lib/python3/dist-packages/bcbio/cwl/workflow.py /usr/lib/python3/dist-packages/bcbio/data/umis/10x_v2-cb1.txt.gz /usr/lib/python3/dist-packages/bcbio/data/umis/10x_v2-transform.json /usr/lib/python3/dist-packages/bcbio/data/umis/dropseq-transform.json /usr/lib/python3/dist-packages/bcbio/data/umis/harvard-indrop-v2-cb1.txt.gz /usr/lib/python3/dist-packages/bcbio/data/umis/harvard-indrop-v2-cb2.txt.gz /usr/lib/python3/dist-packages/bcbio/data/umis/harvard-indrop-v2-transform.json /usr/lib/python3/dist-packages/bcbio/data/umis/harvard-indrop-v3-cb1.txt.gz /usr/lib/python3/dist-packages/bcbio/data/umis/harvard-indrop-v3-cb2.txt.gz /usr/lib/python3/dist-packages/bcbio/data/umis/harvard-indrop-v3-sample_barcodes.txt.gz /usr/lib/python3/dist-packages/bcbio/data/umis/harvard-indrop-v3-transform.json /usr/lib/python3/dist-packages/bcbio/data/umis/harvard-indrop-v31-cb1.txt.gz /usr/lib/python3/dist-packages/bcbio/data/umis/harvard-indrop-v31-cb2.txt.gz /usr/lib/python3/dist-packages/bcbio/data/umis/harvard-indrop-v31-transform.json /usr/lib/python3/dist-packages/bcbio/data/umis/harvard-scrb-cb1.txt.gz /usr/lib/python3/dist-packages/bcbio/data/umis/harvard-scrb-transform.json /usr/lib/python3/dist-packages/bcbio/data/umis/icell8-cb1.txt.gz /usr/lib/python3/dist-packages/bcbio/data/umis/icell8-transform.json /usr/lib/python3/dist-packages/bcbio/data/umis/qiagen_smallRNA_umi-transform.json /usr/lib/python3/dist-packages/bcbio/data/umis/qiaseq-upx-384-cb1.txt.gz /usr/lib/python3/dist-packages/bcbio/data/umis/qiaseq-upx-384-transform.json /usr/lib/python3/dist-packages/bcbio/data/umis/qiaseq-upx-96-cb1.txt.gz /usr/lib/python3/dist-packages/bcbio/data/umis/qiaseq-upx-96-transform.json /usr/lib/python3/dist-packages/bcbio/data/umis/surecell-cb1.txt.gz /usr/lib/python3/dist-packages/bcbio/data/umis/surecell-cb2.txt.gz /usr/lib/python3/dist-packages/bcbio/data/umis/surecell-cb3.txt.gz /usr/lib/python3/dist-packages/bcbio/data/umis/surecell-transform.json /usr/lib/python3/dist-packages/bcbio/distributed/__init__.py /usr/lib/python3/dist-packages/bcbio/distributed/clargs.py /usr/lib/python3/dist-packages/bcbio/distributed/clusterk.py /usr/lib/python3/dist-packages/bcbio/distributed/ipython.py /usr/lib/python3/dist-packages/bcbio/distributed/ipythontasks.py /usr/lib/python3/dist-packages/bcbio/distributed/multi.py /usr/lib/python3/dist-packages/bcbio/distributed/multitasks.py /usr/lib/python3/dist-packages/bcbio/distributed/objectstore.py /usr/lib/python3/dist-packages/bcbio/distributed/prun.py /usr/lib/python3/dist-packages/bcbio/distributed/resources.py /usr/lib/python3/dist-packages/bcbio/distributed/runfn.py /usr/lib/python3/dist-packages/bcbio/distributed/split.py /usr/lib/python3/dist-packages/bcbio/distributed/transaction.py /usr/lib/python3/dist-packages/bcbio/dragen/__init__.py /usr/lib/python3/dist-packages/bcbio/dragen/dragen.py /usr/lib/python3/dist-packages/bcbio/galaxy/__init__.py /usr/lib/python3/dist-packages/bcbio/galaxy/api.py /usr/lib/python3/dist-packages/bcbio/galaxy/loc.py /usr/lib/python3/dist-packages/bcbio/galaxy/nglims.py /usr/lib/python3/dist-packages/bcbio/graph/__init__.py /usr/lib/python3/dist-packages/bcbio/graph/collectl.py /usr/lib/python3/dist-packages/bcbio/graph/graph.py /usr/lib/python3/dist-packages/bcbio/heterogeneity/__init__.py /usr/lib/python3/dist-packages/bcbio/heterogeneity/bubbletree.py /usr/lib/python3/dist-packages/bcbio/heterogeneity/chromhacks.py /usr/lib/python3/dist-packages/bcbio/heterogeneity/loh.py /usr/lib/python3/dist-packages/bcbio/heterogeneity/phylowgs.py /usr/lib/python3/dist-packages/bcbio/heterogeneity/theta.py /usr/lib/python3/dist-packages/bcbio/hla/__init__.py /usr/lib/python3/dist-packages/bcbio/hla/bwakit.py /usr/lib/python3/dist-packages/bcbio/hla/groups.py /usr/lib/python3/dist-packages/bcbio/hla/optitype.py /usr/lib/python3/dist-packages/bcbio/hmmer/__init__.py /usr/lib/python3/dist-packages/bcbio/hmmer/search.py /usr/lib/python3/dist-packages/bcbio/illumina/__init__.py /usr/lib/python3/dist-packages/bcbio/illumina/demultiplex.py /usr/lib/python3/dist-packages/bcbio/illumina/flowcell.py /usr/lib/python3/dist-packages/bcbio/illumina/machine.py /usr/lib/python3/dist-packages/bcbio/illumina/samplesheet.py /usr/lib/python3/dist-packages/bcbio/illumina/transfer.py /usr/lib/python3/dist-packages/bcbio/install.py /usr/lib/python3/dist-packages/bcbio/log/__init__.py /usr/lib/python3/dist-packages/bcbio/log/logbook_zmqpush.py /usr/lib/python3/dist-packages/bcbio/ngsalign/__init__.py /usr/lib/python3/dist-packages/bcbio/ngsalign/alignprep.py /usr/lib/python3/dist-packages/bcbio/ngsalign/bbmap.py /usr/lib/python3/dist-packages/bcbio/ngsalign/bismark.py /usr/lib/python3/dist-packages/bcbio/ngsalign/bowtie.py /usr/lib/python3/dist-packages/bcbio/ngsalign/bowtie2.py /usr/lib/python3/dist-packages/bcbio/ngsalign/bsmap.py /usr/lib/python3/dist-packages/bcbio/ngsalign/bwa.py /usr/lib/python3/dist-packages/bcbio/ngsalign/hisat2.py /usr/lib/python3/dist-packages/bcbio/ngsalign/minimap2.py /usr/lib/python3/dist-packages/bcbio/ngsalign/mosaik.py /usr/lib/python3/dist-packages/bcbio/ngsalign/novoalign.py /usr/lib/python3/dist-packages/bcbio/ngsalign/postalign.py /usr/lib/python3/dist-packages/bcbio/ngsalign/rtg.py /usr/lib/python3/dist-packages/bcbio/ngsalign/snap.py /usr/lib/python3/dist-packages/bcbio/ngsalign/star.py /usr/lib/python3/dist-packages/bcbio/ngsalign/tophat.py /usr/lib/python3/dist-packages/bcbio/picard/__init__.py /usr/lib/python3/dist-packages/bcbio/picard/metrics.py /usr/lib/python3/dist-packages/bcbio/picard/utils.py /usr/lib/python3/dist-packages/bcbio/pipeline/__init__.py /usr/lib/python3/dist-packages/bcbio/pipeline/alignment.py /usr/lib/python3/dist-packages/bcbio/pipeline/archive.py /usr/lib/python3/dist-packages/bcbio/pipeline/cleanbam.py /usr/lib/python3/dist-packages/bcbio/pipeline/config_utils.py /usr/lib/python3/dist-packages/bcbio/pipeline/datadict.py /usr/lib/python3/dist-packages/bcbio/pipeline/disambiguate/__init__.py /usr/lib/python3/dist-packages/bcbio/pipeline/disambiguate/run.py /usr/lib/python3/dist-packages/bcbio/pipeline/fastq.py /usr/lib/python3/dist-packages/bcbio/pipeline/genome.py /usr/lib/python3/dist-packages/bcbio/pipeline/main.py /usr/lib/python3/dist-packages/bcbio/pipeline/merge.py /usr/lib/python3/dist-packages/bcbio/pipeline/qcsummary.py /usr/lib/python3/dist-packages/bcbio/pipeline/region.py /usr/lib/python3/dist-packages/bcbio/pipeline/rnaseq.py /usr/lib/python3/dist-packages/bcbio/pipeline/run_info.py /usr/lib/python3/dist-packages/bcbio/pipeline/sample.py /usr/lib/python3/dist-packages/bcbio/pipeline/shared.py /usr/lib/python3/dist-packages/bcbio/pipeline/sra.py /usr/lib/python3/dist-packages/bcbio/pipeline/tools.py /usr/lib/python3/dist-packages/bcbio/pipeline/variation.py /usr/lib/python3/dist-packages/bcbio/pipeline/version.py /usr/lib/python3/dist-packages/bcbio/provenance/__init__.py /usr/lib/python3/dist-packages/bcbio/provenance/data.py /usr/lib/python3/dist-packages/bcbio/provenance/diagnostics.py /usr/lib/python3/dist-packages/bcbio/provenance/do.py /usr/lib/python3/dist-packages/bcbio/provenance/profile.py /usr/lib/python3/dist-packages/bcbio/provenance/programs.py /usr/lib/python3/dist-packages/bcbio/provenance/system.py /usr/lib/python3/dist-packages/bcbio/provenance/versioncheck.py /usr/lib/python3/dist-packages/bcbio/qc/__init__.py /usr/lib/python3/dist-packages/bcbio/qc/atac.py /usr/lib/python3/dist-packages/bcbio/qc/atropos.py /usr/lib/python3/dist-packages/bcbio/qc/chipseq.py /usr/lib/python3/dist-packages/bcbio/qc/contamination.py /usr/lib/python3/dist-packages/bcbio/qc/coverage.py /usr/lib/python3/dist-packages/bcbio/qc/damage.py /usr/lib/python3/dist-packages/bcbio/qc/fastqc.py /usr/lib/python3/dist-packages/bcbio/qc/kraken.py /usr/lib/python3/dist-packages/bcbio/qc/multiqc.py /usr/lib/python3/dist-packages/bcbio/qc/picard.py /usr/lib/python3/dist-packages/bcbio/qc/preseq.py /usr/lib/python3/dist-packages/bcbio/qc/qsignature.py /usr/lib/python3/dist-packages/bcbio/qc/qualimap.py /usr/lib/python3/dist-packages/bcbio/qc/samtools.py /usr/lib/python3/dist-packages/bcbio/qc/srna.py /usr/lib/python3/dist-packages/bcbio/qc/umi.py /usr/lib/python3/dist-packages/bcbio/qc/variant.py /usr/lib/python3/dist-packages/bcbio/qc/viral.py /usr/lib/python3/dist-packages/bcbio/rnaseq/__init__.py /usr/lib/python3/dist-packages/bcbio/rnaseq/annotate_gtf.py /usr/lib/python3/dist-packages/bcbio/rnaseq/arriba.py /usr/lib/python3/dist-packages/bcbio/rnaseq/bcbiornaseq.py /usr/lib/python3/dist-packages/bcbio/rnaseq/count.py /usr/lib/python3/dist-packages/bcbio/rnaseq/cpat.py /usr/lib/python3/dist-packages/bcbio/rnaseq/cufflinks.py /usr/lib/python3/dist-packages/bcbio/rnaseq/dexseq.py /usr/lib/python3/dist-packages/bcbio/rnaseq/ericscript.py /usr/lib/python3/dist-packages/bcbio/rnaseq/express.py /usr/lib/python3/dist-packages/bcbio/rnaseq/featureCounts.py /usr/lib/python3/dist-packages/bcbio/rnaseq/gtf.py /usr/lib/python3/dist-packages/bcbio/rnaseq/kallisto.py /usr/lib/python3/dist-packages/bcbio/rnaseq/oncofuse.py /usr/lib/python3/dist-packages/bcbio/rnaseq/pizzly.py /usr/lib/python3/dist-packages/bcbio/rnaseq/qc.py /usr/lib/python3/dist-packages/bcbio/rnaseq/rapmap.py /usr/lib/python3/dist-packages/bcbio/rnaseq/rsem.py /usr/lib/python3/dist-packages/bcbio/rnaseq/sailfish.py /usr/lib/python3/dist-packages/bcbio/rnaseq/salmon.py /usr/lib/python3/dist-packages/bcbio/rnaseq/singlecellexperiment.py /usr/lib/python3/dist-packages/bcbio/rnaseq/spikein.py /usr/lib/python3/dist-packages/bcbio/rnaseq/stringtie.py /usr/lib/python3/dist-packages/bcbio/rnaseq/umi.py /usr/lib/python3/dist-packages/bcbio/rnaseq/variation.py /usr/lib/python3/dist-packages/bcbio/scripts/R/bcbio2se.R /usr/lib/python3/dist-packages/bcbio/scripts/R/se2qc.Rmd /usr/lib/python3/dist-packages/bcbio/server/__init__.py /usr/lib/python3/dist-packages/bcbio/server/background.py /usr/lib/python3/dist-packages/bcbio/server/main.py /usr/lib/python3/dist-packages/bcbio/server/run.py /usr/lib/python3/dist-packages/bcbio/setpath.py /usr/lib/python3/dist-packages/bcbio/srna/__init__.py /usr/lib/python3/dist-packages/bcbio/srna/group.py /usr/lib/python3/dist-packages/bcbio/srna/mirdeep.py /usr/lib/python3/dist-packages/bcbio/srna/mirge.py /usr/lib/python3/dist-packages/bcbio/srna/qc.py /usr/lib/python3/dist-packages/bcbio/srna/sample.py /usr/lib/python3/dist-packages/bcbio/srna/umis.py /usr/lib/python3/dist-packages/bcbio/structural/__init__.py /usr/lib/python3/dist-packages/bcbio/structural/annotate.py /usr/lib/python3/dist-packages/bcbio/structural/battenberg.py /usr/lib/python3/dist-packages/bcbio/structural/cn_mops.py /usr/lib/python3/dist-packages/bcbio/structural/cnvkit.py /usr/lib/python3/dist-packages/bcbio/structural/convert.py /usr/lib/python3/dist-packages/bcbio/structural/delly.py /usr/lib/python3/dist-packages/bcbio/structural/gatkcnv.py /usr/lib/python3/dist-packages/bcbio/structural/gridss.py /usr/lib/python3/dist-packages/bcbio/structural/hydra.py /usr/lib/python3/dist-packages/bcbio/structural/lumpy.py /usr/lib/python3/dist-packages/bcbio/structural/manta.py /usr/lib/python3/dist-packages/bcbio/structural/metasv.py /usr/lib/python3/dist-packages/bcbio/structural/pindel.py /usr/lib/python3/dist-packages/bcbio/structural/plot.py /usr/lib/python3/dist-packages/bcbio/structural/prioritize.py /usr/lib/python3/dist-packages/bcbio/structural/purecn.py /usr/lib/python3/dist-packages/bcbio/structural/purple.py /usr/lib/python3/dist-packages/bcbio/structural/regions.py /usr/lib/python3/dist-packages/bcbio/structural/scramble.py /usr/lib/python3/dist-packages/bcbio/structural/seq2c.py /usr/lib/python3/dist-packages/bcbio/structural/shared.py /usr/lib/python3/dist-packages/bcbio/structural/titancna.py /usr/lib/python3/dist-packages/bcbio/structural/validate.py /usr/lib/python3/dist-packages/bcbio/structural/wham.py /usr/lib/python3/dist-packages/bcbio/upload/__init__.py /usr/lib/python3/dist-packages/bcbio/upload/filesystem.py /usr/lib/python3/dist-packages/bcbio/upload/galaxy.py /usr/lib/python3/dist-packages/bcbio/upload/irods.py /usr/lib/python3/dist-packages/bcbio/upload/s3.py /usr/lib/python3/dist-packages/bcbio/upload/shared.py /usr/lib/python3/dist-packages/bcbio/utils.py /usr/lib/python3/dist-packages/bcbio/variation/__init__.py /usr/lib/python3/dist-packages/bcbio/variation/annotation.py /usr/lib/python3/dist-packages/bcbio/variation/bamprep.py /usr/lib/python3/dist-packages/bcbio/variation/bedutils.py /usr/lib/python3/dist-packages/bcbio/variation/cortex.py /usr/lib/python3/dist-packages/bcbio/variation/coverage.py /usr/lib/python3/dist-packages/bcbio/variation/damage.py /usr/lib/python3/dist-packages/bcbio/variation/deepvariant.py /usr/lib/python3/dist-packages/bcbio/variation/effects.py /usr/lib/python3/dist-packages/bcbio/variation/ensemble.py /usr/lib/python3/dist-packages/bcbio/variation/freebayes.py /usr/lib/python3/dist-packages/bcbio/variation/gatk.py /usr/lib/python3/dist-packages/bcbio/variation/gatkfilter.py /usr/lib/python3/dist-packages/bcbio/variation/gatkjoint.py /usr/lib/python3/dist-packages/bcbio/variation/genotype.py /usr/lib/python3/dist-packages/bcbio/variation/germline.py /usr/lib/python3/dist-packages/bcbio/variation/joint.py /usr/lib/python3/dist-packages/bcbio/variation/multi.py /usr/lib/python3/dist-packages/bcbio/variation/mutect.py /usr/lib/python3/dist-packages/bcbio/variation/mutect2.py /usr/lib/python3/dist-packages/bcbio/variation/naming.py /usr/lib/python3/dist-packages/bcbio/variation/normalize.py /usr/lib/python3/dist-packages/bcbio/variation/octopus.py /usr/lib/python3/dist-packages/bcbio/variation/peddy.py /usr/lib/python3/dist-packages/bcbio/variation/pisces.py /usr/lib/python3/dist-packages/bcbio/variation/platypus.py /usr/lib/python3/dist-packages/bcbio/variation/ploidy.py /usr/lib/python3/dist-packages/bcbio/variation/population.py /usr/lib/python3/dist-packages/bcbio/variation/prioritize.py /usr/lib/python3/dist-packages/bcbio/variation/qsnp.py /usr/lib/python3/dist-packages/bcbio/variation/realign.py /usr/lib/python3/dist-packages/bcbio/variation/recalibrate.py /usr/lib/python3/dist-packages/bcbio/variation/samtools.py /usr/lib/python3/dist-packages/bcbio/variation/scalpel.py /usr/lib/python3/dist-packages/bcbio/variation/sentieon.py /usr/lib/python3/dist-packages/bcbio/variation/smcounter2.py /usr/lib/python3/dist-packages/bcbio/variation/split.py /usr/lib/python3/dist-packages/bcbio/variation/strelka2.py /usr/lib/python3/dist-packages/bcbio/variation/validate.py /usr/lib/python3/dist-packages/bcbio/variation/validateplot.py /usr/lib/python3/dist-packages/bcbio/variation/vardict.py /usr/lib/python3/dist-packages/bcbio/variation/varscan.py /usr/lib/python3/dist-packages/bcbio/variation/vcfanno.py /usr/lib/python3/dist-packages/bcbio/variation/vcfutils.py /usr/lib/python3/dist-packages/bcbio/variation/vfilter.py /usr/lib/python3/dist-packages/bcbio/wgbsseq/__init__.py /usr/lib/python3/dist-packages/bcbio/wgbsseq/align.py /usr/lib/python3/dist-packages/bcbio/wgbsseq/cpg_caller.py /usr/lib/python3/dist-packages/bcbio/wgbsseq/deduplication.py /usr/lib/python3/dist-packages/bcbio/wgbsseq/kits.py /usr/lib/python3/dist-packages/bcbio/wgbsseq/trimming.py /usr/lib/python3/dist-packages/bcbio/workflow/__init__.py /usr/lib/python3/dist-packages/bcbio/workflow/stormseq.py /usr/lib/python3/dist-packages/bcbio/workflow/template.py /usr/lib/python3/dist-packages/bcbio/workflow/xprize.py /usr/lib/python3/dist-packages/bcbio_nextgen-1.2.9.egg-info/PKG-INFO /usr/lib/python3/dist-packages/bcbio_nextgen-1.2.9.egg-info/dependency_links.txt /usr/lib/python3/dist-packages/bcbio_nextgen-1.2.9.egg-info/not-zip-safe /usr/lib/python3/dist-packages/bcbio_nextgen-1.2.9.egg-info/top_level.txt /usr/share/doc/python3-bcbio/README.Debian /usr/share/doc/python3-bcbio/TODO.Debian.gz /usr/share/doc/python3-bcbio/changelog.Debian.gz /usr/share/doc/python3-bcbio/copyright