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[ Source: augur  ]

Links for augur

Ubuntu Resources:

• Bug Reports
• Ubuntu Changelog
• Copyright File

Download Source Package augur:

• [augur_24.4.0-3.dsc]
• [augur_24.4.0.orig.tar.gz]
• [augur_24.4.0-3.debian.tar.xz]

Maintainer:

• Ubuntu MOTU Developers (Mail Archive)

Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.

Original Maintainers (usually from Debian):

• Debian Med Packaging Team (Mail Archive)
• Andreas Tille
• Étienne Mollier

It should generally not be necessary for users to contact the original maintainer.

External Resources:

• Homepage [github.com]

Similar packages:

• postgresql-16-age
• postgresql-17-age
• postgresql-18-age
• clamav-freshclam
• libcoq-coquelicot
• logdata-anomaly-miner
• octave-tsa
• python3-nipype
• octave-tisean
• python-nipype-doc
• r-cran-xts

Other Packages Related to augur

depends

recommends

suggests

enhances

• dep: fasttree

  phylogenetic trees from alignments of nucleotide or protein sequences

• dep: mafft

  Multiple alignment program for amino acid or nucleotide sequences

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-bcbio-gff

  Python3 library to read and write Generic Feature Format

• dep: python3-biopython

  Python3 library for bioinformatics

• dep: python3-boto3

  Python interface to Amazon's Web Services - Python 3.x

• dep: python3-cvxopt

  Python3 package for convex optimization

• dep: python3-dendropy

  DendroPy Phylogenetic Computing Library (Python 3)

• dep: python3-ipdb

  IPython-based pdb replacement (Python 3 version)

• dep: python3-isodate

  ISO 8601 date/time/duration parser and formatter (Python 3 module)

• dep: python3-jsonschema

  An(other) implementation of JSON Schema

• dep: python3-matplotlib

  Python based plotting system in a style similar to Matlab

• dep: python3-networkx

  tool to create, manipulate and study complex networks (Python3)

• dep: python3-numpy

  Python library for numerical computations (Python 3)

• dep: python3-packaging

  core utilities for python3 packages

• dep: python3-pandas

  data structures for "relational" or "labeled" data

• dep: python3-pyfastx

  fast random access to sequences from FASTA/Q file - python3 module

• dep: python3-schedule

  Job scheduling for humans (Python 3)

• dep: python3-scipy

  scientific tools for Python 3

• dep: python3-seaborn

  statistical visualization library for Python3

• dep: python3-treetime (>= 0.9.4)

  inference of time stamped phylogenies and ancestral reconstruction (Python 3)

• dep: python3-xopen (>= 1.7.0-1~)

  Python3 module to open compressed files transparently

• dep: python3-zstandard

  Python bindings for interfacing with Zstandard library

• dep: raxml

  Randomized Axelerated Maximum Likelihood of phylogenetic trees

• dep: seqmagick

  imagemagick-like frontend to Biopython SeqIO

• dep: vcftools

  Collection of tools to work with VCF files

• rec: iqtree

  efficient phylogenetic software by maximum likelihood

Download augur

Download for all available architectures

Architecture	Package Size	Installed Size	Files
all	232.4 kB	1,028.0 kB	[list of files]