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源码包: snpeff (5.2.f+dfsg-1build1) [universe]

snpeff 的相关链接

Ubuntu 的资源:

维护者:

Ubuntu MOTU Developers (Mail Archive)

Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.

Original Maintainers (usually from Debian):

Debian Med Packaging Team (Mail Archive)
Andreas Tille
Pierre Gruet

It should generally not be necessary for users to contact the original maintainer.

外部的资源:

主页 [pcingola.github.io]

本源码包构建了以下这些二进制包:

libsnpeff-java: genetic variant annotation and effect prediction toolbox - lib
libsnpeff-java-doc: Documentation for Snp Effect
snpeff: genetic variant annotation and effect prediction toolbox - tool

其他与 snpeff 有关的软件包

完整构建时刻依赖

单独构建时刻依赖

adep: debhelper-compat (= 13)

软件包暂时不可用
adep: javahelper

Helper scripts for packaging Java programs
adep: default-jdk

Standard Java or Java compatible Development Kit
adep: default-jdk-doc

Standard Java or Java compatible Development Kit (documentation)
adep: maven-debian-helper

Helper tools for building Debian packages with Maven
adep: libmaven-assembly-plugin-java

Maven Assembly Plugin
adep: libtrove3-java

high performance collections for java
adep: libhtsjdk-java

Java API for high-throughput sequencing data (HTS) formats
adep: libbiojava6-java

Java API to biological data and applications (version 6)
adep: junit5

JUnit regression test framework for Java
adep: libcommons-codec-java

encoder and decoders such as Base64 and hexadecimal codec
adep: libcommons-io-java

Common useful IO related classes
adep: libcommons-cli-java

Command line arguments and options parsing library
adep: libcommons-math3-java

Java lightweight mathematics and statistics components
adep: libfreemarker-java

template engine written in Java
adep: libjaxb-api-java

Java Architecture for XML Binding API
adep: libmaven-javadoc-plugin-java

Maven Javadoc Plugin
adep: libbiojava6-java-doc

[Biology] Documentation for BioJava 6
adep: libtrove3-java-doc

high performance collections for java
adep: libcharts4j-java

free, lightweight charts and graphs Java API
adep: libapfloat-java

high performance arbitrary precision arithmetic library for Java
adep: libdistlib-java

Java library of statistical distribution functions

Download snpeff

文件	大小(单位: kB)	MD5 校验码
snpeff_5.2.f+dfsg.orig.tar.xz	151,303.2 kB	4a630eadf7a8b0d65e8341356a924a02
snpeff_5.2.f+dfsg-1build1.debian.tar.xz	14.0 kB	366b46f723937dabde7efbbd1e6358b0
snpeff_5.2.f+dfsg-1build1.dsc	2.5 kB	f5ff14896939bbcbffab8e6aeb51d4b3

Debian 软件包源码仓库(VCS: Git): https://salsa.debian.org/med-team/snpeff.git
Debian 软件包源码仓库(可在线浏览): https://salsa.debian.org/med-team/snpeff