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[ Source: circlator  ]

Links for circlator

Ubuntu Resources:

• Bug Reports
• Ubuntu Changelog
• Copyright File

Download Source Package circlator:

• [circlator_1.5.6-6.dsc]
• [circlator_1.5.6.orig.tar.gz]
• [circlator_1.5.6-6.debian.tar.xz]

Maintainer:

• Ubuntu MOTU Developers (Mail Archive)

Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.

Original Maintainers (usually from Debian):

• Debian Med Packaging Team (Mail Archive)
• Andreas Tille

It should generally not be necessary for users to contact the original maintainer.

External Resources:

• Homepage [sanger-pathogens.github.io]

Similar packages:

• kaptive-data
• kaptive-example
• kleborate-examples
• ray
• kaptive
• atac
• pbjelly
• python3-shasta-doc
• python3-shasta
• reapr
• shasta

Other Packages Related to circlator

depends

recommends

suggests

enhances

• dep: bwa (>= 0.7.12)

  Burrows-Wheeler Aligner

• dep: canu

  single molecule sequence assembler for genomes

• dep: fastaq (>= 3.12.1)

  FASTA and FASTQ file manipulation tools

• dep: mummer

  Efficient sequence alignment of full genomes

• dep: prodigal

  Microbial (bacterial and archaeal) gene finding program

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-openpyxl

  Python 3 module to read/write OpenXML xlsx/xlsm files

• dep: python3-pymummer

  Python 3 interface to MUMmer

• dep: python3-pysam

  interface for the SAM/BAM sequence alignment and mapping format (Python 3)

• dep: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

• dep: spades

  genome assembler for single-cell and isolates data sets

Download circlator

Download for all available architectures

Architecture	Package Size	Installed Size	Files
amd64	4,375.6 kB	10,527.0 kB	[list of files]