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[ Source: unicycler  ]

Package: unicycler (0.5.1+dfsg-3) [universe]

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Download Source Package unicycler:

Maintainer:

Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.

Original Maintainers (usually from Debian):

  • Debian Med Packaging Team (Mail Archive)
  • Andreas Tille
  • Liubov Chuprikova

It should generally not be necessary for users to contact the original maintainer.

External Resources:

Similar packages:

hybrid assembly pipeline for bacterial genomes

Other Packages Related to unicycler

  • depends
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  • dep: bcftools
    genomic variant calling and manipulation of VCF/BCF files
  • dep: bowtie2
    ultrafast memory-efficient short read aligner
  • dep: default-jre
    Standard Java or Java compatible Runtime
  • dep: libc6 (>= 2.38)
    GNU C Library: Shared libraries
  • dep: libgcc-s1 (>= 3.3.1)
    GCC support library
  • dep: libstdc++6 (>= 14)
    GNU Standard C++ Library v3
  • dep: miniasm
    ultrafast de novo assembler for long noisy DNA sequencing reads
  • dep: ncbi-blast+
    next generation suite of BLAST sequence search tools
  • dep: pilon
    automated genome assembly improvement and variant detection tool
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
    dep: python3 (>= 3~)
  • dep: racon
    consensus module for raw de novo DNA assembly of long uncorrected reads
  • dep: samtools
    processing sequence alignments in SAM, BAM and CRAM formats
  • dep: spades (>= 3.14)
    genome assembler for single-cell and isolates data sets
  • dep: zlib1g (>= 1:1.1.4)
    compression library - runtime
  • rec: unicycler-data
    hybrid assembly pipeline for bacterial genomes (data package)

Download unicycler

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 889.0 kB2,990.0 kB [list of files]