[ jammy ] [ noble ] [ questing ] [ resolute ] [ stonking ]

Source Package: unicycler (0.5.1+dfsg-3) [universe]

Links for unicycler

Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.

It should generally not be necessary for users to contact the original maintainer.

The following binary packages are built from this source package:

unicycler: hybrid assembly pipeline for bacterial genomes
unicycler-data: hybrid assembly pipeline for bacterial genomes (data package)

adep: debhelper-compat (= 13)

Package not available
adep: dh-sequence-python3

virtual package provided by dh-python
adep: python3-all

package depending on all supported Python 3 runtime versions
adep: python3-setuptools

Python3 Distutils Enhancements
adep: default-jdk

Standard Java or Java compatible Development Kit
adep: bcftools

genomic variant calling and manipulation of VCF/BCF files
adep: bowtie2

ultrafast memory-efficient short read aligner
adep: miniasm

ultrafast de novo assembler for long noisy DNA sequencing reads
adep: ncbi-blast+

next generation suite of BLAST sequence search tools
adep: pilon

automated genome assembly improvement and variant detection tool
adep: racon

consensus module for raw de novo DNA assembly of long uncorrected reads
adep: samtools

processing sequence alignments in SAM, BAM and CRAM formats
adep: spades (>= 3.14)

genome assembler for single-cell and isolates data sets
adep: libseqan2-dev

C++ library for the analysis of biological sequences (development)
adep: zlib1g-dev

compression library - development

Debian Package Source Repository (VCS: Git): https://salsa.debian.org/med-team/unicycler.git
Debian Package Source Repository (Browsable): https://salsa.debian.org/med-team/unicycler