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[ Source: cnvkit  ]

Package: cnvkit (0.9.9-2) [universe]

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Download Source Package cnvkit:

Maintainer:

Please consider filing a bug or asking a question via Launchpad before contacting the maintainer directly.

Original Maintainers (usually from Debian):

  • Debian Med Packaging Team (Mail Archive)
  • Michael R. Crusoe
  • Steffen Moeller
  • Olivier Sallou

It should generally not be necessary for users to contact the original maintainer.

External Resources:

Similar packages:

Copy number variant detection from targeted DNA sequencing

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Download cnvkit

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 15,757.7 kB69,064.0 kB [list of files]
arm64 15,757.7 kB69,064.0 kB [list of files]
ppc64el 15,757.7 kB69,064.0 kB [list of files]